Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
PTPDC1A2A3K4 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTPDC1A2A3K4 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTPDC1A2A3K4 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTPDC1A2A3K4 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTPDC1A2A3K4 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTPDC1A2A3K4 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC17.86■□□□□ 0.45
PTPDC1A2A3K4 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC17.86■□□□□ 0.45
PTPDC1A2A3K4 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTPDC1A2A3K4 AL157414.3-201ENST00000624276 1954 ntBASIC17.86■□□□□ 0.45
PTPDC1A2A3K4 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC17.86■□□□□ 0.45
PTPDC1A2A3K4 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC17.86■□□□□ 0.45
PTPDC1A2A3K4 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
PTPDC1A2A3K4 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTPDC1A2A3K4 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTPDC1A2A3K4 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTPDC1A2A3K4 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PTPDC1A2A3K4 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTPDC1A2A3K4 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
PTPDC1A2A3K4 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTPDC1A2A3K4 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTPDC1A2A3K4 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTPDC1A2A3K4 MSTO2P-201ENST00000314835 1709 ntBASIC17.85■□□□□ 0.45
PTPDC1A2A3K4 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PTPDC1A2A3K4 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTPDC1A2A3K4 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PTPDC1A2A3K4 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC17.85■□□□□ 0.45
PTPDC1A2A3K4 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTPDC1A2A3K4 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC17.85■□□□□ 0.45
PTPDC1A2A3K4 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
PTPDC1A2A3K4 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.85■□□□□ 0.45
PTPDC1A2A3K4 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC17.85■□□□□ 0.45
PTPDC1A2A3K4 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
PTPDC1A2A3K4 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC17.85■□□□□ 0.45
PTPDC1A2A3K4 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PTPDC1A2A3K4 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.85■□□□□ 0.45
PTPDC1A2A3K4 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
PTPDC1A2A3K4 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC17.85■□□□□ 0.45
PTPDC1A2A3K4 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTPDC1A2A3K4 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PTPDC1A2A3K4 PDIA3P1-201ENST00000471856 1510 ntBASIC17.85■□□□□ 0.45
PTPDC1A2A3K4 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PTPDC1A2A3K4 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
PTPDC1A2A3K4 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PTPDC1A2A3K4 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTPDC1A2A3K4 AC009486.1-201ENST00000569860 813 ntBASIC17.85■□□□□ 0.45
PTPDC1A2A3K4 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17.85■□□□□ 0.45
PTPDC1A2A3K4 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.85■□□□□ 0.45
PTPDC1A2A3K4 AC007292.2-201ENST00000593524 1812 ntBASIC17.85■□□□□ 0.45
PTPDC1A2A3K4 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTPDC1A2A3K4 RPS24-214ENST00000613865 538 ntTSL 5 BASIC17.85■□□□□ 0.45
PTPDC1A2A3K4 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
PTPDC1A2A3K4 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTPDC1A2A3K4 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTPDC1A2A3K4 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTPDC1A2A3K4 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC17.84■□□□□ 0.45
PTPDC1A2A3K4 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTPDC1A2A3K4 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PTPDC1A2A3K4 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTPDC1A2A3K4 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC17.84■□□□□ 0.45
PTPDC1A2A3K4 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
PTPDC1A2A3K4 AC007787.1-201ENST00000588095 1583 ntBASIC17.84■□□□□ 0.45
PTPDC1A2A3K4 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTPDC1A2A3K4 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PTPDC1A2A3K4 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.84■□□□□ 0.45
PTPDC1A2A3K4 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC17.84■□□□□ 0.45
PTPDC1A2A3K4 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC17.84■□□□□ 0.45
PTPDC1A2A3K4 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTPDC1A2A3K4 LILRP1-201ENST00000444199 1370 ntBASIC17.84■□□□□ 0.45
PTPDC1A2A3K4 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PTPDC1A2A3K4 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTPDC1A2A3K4 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PTPDC1A2A3K4 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC17.84■□□□□ 0.45
PTPDC1A2A3K4 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTPDC1A2A3K4 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.84■□□□□ 0.45
PTPDC1A2A3K4 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC17.84■□□□□ 0.45
PTPDC1A2A3K4 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PTPDC1A2A3K4 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PTPDC1A2A3K4 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PTPDC1A2A3K4 AL355864.2-201ENST00000447420 863 ntBASIC17.84■□□□□ 0.45
PTPDC1A2A3K4 CTBP2P5-201ENST00000454986 1264 ntBASIC17.84■□□□□ 0.45
PTPDC1A2A3K4 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.84■□□□□ 0.45
PTPDC1A2A3K4 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC17.84■□□□□ 0.45
PTPDC1A2A3K4 AC004066.1-201ENST00000502488 802 ntBASIC17.84■□□□□ 0.45
PTPDC1A2A3K4 AC026410.3-201ENST00000514280 936 ntBASIC17.84■□□□□ 0.45
PTPDC1A2A3K4 AP001889.1-201ENST00000525414 633 ntBASIC17.84■□□□□ 0.45
PTPDC1A2A3K4 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC17.84■□□□□ 0.45
PTPDC1A2A3K4 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
PTPDC1A2A3K4 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC17.84■□□□□ 0.45
PTPDC1A2A3K4 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTPDC1A2A3K4 AC232323.1-201ENST00000540724 2099 ntBASIC17.84■□□□□ 0.45
PTPDC1A2A3K4 REXO1L5P-201ENST00000622260 2098 ntBASIC17.84■□□□□ 0.45
PTPDC1A2A3K4 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC17.84■□□□□ 0.45
PTPDC1A2A3K4 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC17.84■□□□□ 0.45
PTPDC1A2A3K4 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTPDC1A2A3K4 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.84■□□□□ 0.45
PTPDC1A2A3K4 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC17.83■□□□□ 0.45
PTPDC1A2A3K4 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.45
PTPDC1A2A3K4 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.45
PTPDC1A2A3K4 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms