Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB13Q9Y5F0 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB13Q9Y5F0 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB13Q9Y5F0 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDHB13Q9Y5F0 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB13Q9Y5F0 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB13Q9Y5F0 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDHB13Q9Y5F0 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB13Q9Y5F0 AC023824.1-201ENST00000562945 2975 ntBASIC16.94■□□□□ 0.3
PCDHB13Q9Y5F0 LINC02228-204ENST00000642115 2962 ntBASIC16.94■□□□□ 0.3
PCDHB13Q9Y5F0 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PCDHB13Q9Y5F0 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB13Q9Y5F0 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.94■□□□□ 0.3
PCDHB13Q9Y5F0 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB13Q9Y5F0 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB13Q9Y5F0 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB13Q9Y5F0 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDHB13Q9Y5F0 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.94■□□□□ 0.3
PCDHB13Q9Y5F0 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB13Q9Y5F0 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB13Q9Y5F0 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB13Q9Y5F0 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB13Q9Y5F0 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.93■□□□□ 0.3
PCDHB13Q9Y5F0 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
PCDHB13Q9Y5F0 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHB13Q9Y5F0 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB13Q9Y5F0 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB13Q9Y5F0 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB13Q9Y5F0 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PCDHB13Q9Y5F0 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB13Q9Y5F0 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB13Q9Y5F0 AC092964.1-201ENST00000623304 1399 ntBASIC16.93■□□□□ 0.3
PCDHB13Q9Y5F0 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHB13Q9Y5F0 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB13Q9Y5F0 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB13Q9Y5F0 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB13Q9Y5F0 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB13Q9Y5F0 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB13Q9Y5F0 RPL5-202ENST00000370321 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB13Q9Y5F0 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHB13Q9Y5F0 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHB13Q9Y5F0 AL645937.2-201ENST00000396808 931 ntBASIC16.93■□□□□ 0.3
PCDHB13Q9Y5F0 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.93■□□□□ 0.3
PCDHB13Q9Y5F0 SOCS2P1-201ENST00000417727 557 ntBASIC16.93■□□□□ 0.3
PCDHB13Q9Y5F0 NUS1P3-201ENST00000423502 862 ntBASIC16.93■□□□□ 0.3
PCDHB13Q9Y5F0 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.93■□□□□ 0.3
PCDHB13Q9Y5F0 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.93■□□□□ 0.3
PCDHB13Q9Y5F0 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.93■□□□□ 0.3
PCDHB13Q9Y5F0 AL359711.2-201ENST00000563105 872 ntBASIC16.93■□□□□ 0.3
PCDHB13Q9Y5F0 SPDYE22P-201ENST00000582158 798 ntBASIC16.93■□□□□ 0.3
PCDHB13Q9Y5F0 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB13Q9Y5F0 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.93■□□□□ 0.3
PCDHB13Q9Y5F0 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PCDHB13Q9Y5F0 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB13Q9Y5F0 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB13Q9Y5F0 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB13Q9Y5F0 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB13Q9Y5F0 AC093525.8-201ENST00000624099 1342 ntBASIC16.93■□□□□ 0.3
PCDHB13Q9Y5F0 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB13Q9Y5F0 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB13Q9Y5F0 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB13Q9Y5F0 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHB13Q9Y5F0 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHB13Q9Y5F0 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB13Q9Y5F0 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PCDHB13Q9Y5F0 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB13Q9Y5F0 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB13Q9Y5F0 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHB13Q9Y5F0 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHB13Q9Y5F0 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB13Q9Y5F0 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB13Q9Y5F0 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB13Q9Y5F0 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.92■□□□□ 0.3
PCDHB13Q9Y5F0 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB13Q9Y5F0 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHB13Q9Y5F0 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB13Q9Y5F0 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PCDHB13Q9Y5F0 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB13Q9Y5F0 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB13Q9Y5F0 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB13Q9Y5F0 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB13Q9Y5F0 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB13Q9Y5F0 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB13Q9Y5F0 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB13Q9Y5F0 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB13Q9Y5F0 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB13Q9Y5F0 AC019070.1-201ENST00000415008 1024 ntBASIC16.92■□□□□ 0.3
PCDHB13Q9Y5F0 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHB13Q9Y5F0 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB13Q9Y5F0 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.92■□□□□ 0.3
PCDHB13Q9Y5F0 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC16.92■□□□□ 0.3
PCDHB13Q9Y5F0 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.92■□□□□ 0.3
PCDHB13Q9Y5F0 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.92■□□□□ 0.3
PCDHB13Q9Y5F0 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB13Q9Y5F0 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.92■□□□□ 0.3
PCDHB13Q9Y5F0 ENPP7P5-201ENST00000541031 1031 ntBASIC16.92■□□□□ 0.3
PCDHB13Q9Y5F0 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.92■□□□□ 0.3
PCDHB13Q9Y5F0 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC16.92■□□□□ 0.3
PCDHB13Q9Y5F0 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
PCDHB13Q9Y5F0 AC124283.3-201ENST00000570869 594 ntBASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms