Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.37□□□□□ -0.27
RHBDD3Q9Y3P4 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RHBDD3Q9Y3P4 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RHBDD3Q9Y3P4 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RHBDD3Q9Y3P4 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
RHBDD3Q9Y3P4 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
RHBDD3Q9Y3P4 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RHBDD3Q9Y3P4 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RHBDD3Q9Y3P4 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RHBDD3Q9Y3P4 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.37□□□□□ -0.27
RHBDD3Q9Y3P4 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.37□□□□□ -0.27
RHBDD3Q9Y3P4 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RHBDD3Q9Y3P4 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RHBDD3Q9Y3P4 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RHBDD3Q9Y3P4 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.37□□□□□ -0.27
RHBDD3Q9Y3P4 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.37□□□□□ -0.27
RHBDD3Q9Y3P4 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RHBDD3Q9Y3P4 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
RHBDD3Q9Y3P4 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RHBDD3Q9Y3P4 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
RHBDD3Q9Y3P4 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RHBDD3Q9Y3P4 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.37□□□□□ -0.27
RHBDD3Q9Y3P4 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RHBDD3Q9Y3P4 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RHBDD3Q9Y3P4 AL133267.1-201ENST00000398220 340 ntBASIC13.37□□□□□ -0.27
RHBDD3Q9Y3P4 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.37□□□□□ -0.27
RHBDD3Q9Y3P4 TOMM22P5-201ENST00000416399 439 ntBASIC13.37□□□□□ -0.27
RHBDD3Q9Y3P4 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
RHBDD3Q9Y3P4 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
RHBDD3Q9Y3P4 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.37□□□□□ -0.27
RHBDD3Q9Y3P4 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RHBDD3Q9Y3P4 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.37□□□□□ -0.27
RHBDD3Q9Y3P4 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
RHBDD3Q9Y3P4 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.37□□□□□ -0.27
RHBDD3Q9Y3P4 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC13.37□□□□□ -0.27
RHBDD3Q9Y3P4 AL390754.1-201ENST00000619088 582 ntBASIC13.37□□□□□ -0.27
RHBDD3Q9Y3P4 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
RHBDD3Q9Y3P4 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.37□□□□□ -0.27
RHBDD3Q9Y3P4 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
RHBDD3Q9Y3P4 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.37□□□□□ -0.27
RHBDD3Q9Y3P4 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.37□□□□□ -0.27
RHBDD3Q9Y3P4 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
RHBDD3Q9Y3P4 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RHBDD3Q9Y3P4 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.37□□□□□ -0.27
RHBDD3Q9Y3P4 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RHBDD3Q9Y3P4 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RHBDD3Q9Y3P4 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RHBDD3Q9Y3P4 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
RHBDD3Q9Y3P4 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
RHBDD3Q9Y3P4 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
RHBDD3Q9Y3P4 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
RHBDD3Q9Y3P4 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RHBDD3Q9Y3P4 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
RHBDD3Q9Y3P4 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RHBDD3Q9Y3P4 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RHBDD3Q9Y3P4 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.36□□□□□ -0.27
RHBDD3Q9Y3P4 AC126335.2-201ENST00000623362 4637 ntBASIC13.36□□□□□ -0.27
RHBDD3Q9Y3P4 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
RHBDD3Q9Y3P4 AL121723.1-201ENST00000445194 1519 ntBASIC13.36□□□□□ -0.27
RHBDD3Q9Y3P4 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RHBDD3Q9Y3P4 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RHBDD3Q9Y3P4 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RHBDD3Q9Y3P4 TSSK5P-201ENST00000423978 907 ntBASIC13.36□□□□□ -0.27
RHBDD3Q9Y3P4 AC055876.3-201ENST00000431496 288 ntBASIC13.36□□□□□ -0.27
RHBDD3Q9Y3P4 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.36□□□□□ -0.27
RHBDD3Q9Y3P4 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
RHBDD3Q9Y3P4 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.36□□□□□ -0.27
RHBDD3Q9Y3P4 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.36□□□□□ -0.27
RHBDD3Q9Y3P4 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC13.36□□□□□ -0.27
RHBDD3Q9Y3P4 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC13.36□□□□□ -0.27
RHBDD3Q9Y3P4 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.36□□□□□ -0.27
RHBDD3Q9Y3P4 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
RHBDD3Q9Y3P4 ZNF890P-202ENST00000530367 1156 ntBASIC13.36□□□□□ -0.27
RHBDD3Q9Y3P4 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.36□□□□□ -0.27
RHBDD3Q9Y3P4 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
RHBDD3Q9Y3P4 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RHBDD3Q9Y3P4 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.36□□□□□ -0.27
RHBDD3Q9Y3P4 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.36□□□□□ -0.27
RHBDD3Q9Y3P4 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
RHBDD3Q9Y3P4 AC138649.4-201ENST00000612222 287 ntBASIC13.36□□□□□ -0.27
RHBDD3Q9Y3P4 AC106028.4-201ENST00000614509 607 ntBASIC13.36□□□□□ -0.27
RHBDD3Q9Y3P4 AC093512.1-201ENST00000617969 520 ntBASIC13.36□□□□□ -0.27
RHBDD3Q9Y3P4 AC004461.2-201ENST00000629517 803 ntBASIC13.36□□□□□ -0.27
RHBDD3Q9Y3P4 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.36□□□□□ -0.27
RHBDD3Q9Y3P4 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.36□□□□□ -0.27
RHBDD3Q9Y3P4 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RHBDD3Q9Y3P4 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RHBDD3Q9Y3P4 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RHBDD3Q9Y3P4 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.36□□□□□ -0.27
RHBDD3Q9Y3P4 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RHBDD3Q9Y3P4 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RHBDD3Q9Y3P4 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RHBDD3Q9Y3P4 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.36□□□□□ -0.27
RHBDD3Q9Y3P4 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RHBDD3Q9Y3P4 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RHBDD3Q9Y3P4 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RHBDD3Q9Y3P4 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
RHBDD3Q9Y3P4 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.36□□□□□ -0.27
RHBDD3Q9Y3P4 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.36□□□□□ -0.27
RHBDD3Q9Y3P4 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms