Protein–RNA interactions for Protein: Q9UQP3

TNN, Tenascin-N, humanhuman

Predictions only

Length 1,299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNQ9UQP3 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TNNQ9UQP3 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TNNQ9UQP3 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TNNQ9UQP3 AP006294.1-201ENST00000415407 339 ntBASIC19.21■□□□□ 0.67
TNNQ9UQP3 COX5BP8-201ENST00000416911 349 ntBASIC19.21■□□□□ 0.67
TNNQ9UQP3 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC19.21■□□□□ 0.67
TNNQ9UQP3 ACTG1P3-201ENST00000431775 1114 ntBASIC19.21■□□□□ 0.67
TNNQ9UQP3 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TNNQ9UQP3 PTPA-220ENST00000436883 532 ntTSL 4 BASIC19.21■□□□□ 0.67
TNNQ9UQP3 AC012441.1-201ENST00000446669 685 ntBASIC19.21■□□□□ 0.67
TNNQ9UQP3 AP001889.1-201ENST00000525414 633 ntBASIC19.21■□□□□ 0.67
TNNQ9UQP3 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC19.21■□□□□ 0.67
TNNQ9UQP3 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
TNNQ9UQP3 ENPP7P5-201ENST00000541031 1031 ntBASIC19.21■□□□□ 0.67
TNNQ9UQP3 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC19.21■□□□□ 0.67
TNNQ9UQP3 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC19.21■□□□□ 0.67
TNNQ9UQP3 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC19.21■□□□□ 0.67
TNNQ9UQP3 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC19.21■□□□□ 0.67
TNNQ9UQP3 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC19.21■□□□□ 0.67
TNNQ9UQP3 AC113367.3-201ENST00000508316 1912 ntBASIC19.21■□□□□ 0.67
TNNQ9UQP3 FAM45BP-202ENST00000592932 1624 ntBASIC19.21■□□□□ 0.67
TNNQ9UQP3 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TNNQ9UQP3 AC134312.5-201ENST00000568031 1313 ntBASIC19.21■□□□□ 0.67
TNNQ9UQP3 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TNNQ9UQP3 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TNNQ9UQP3 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNNQ9UQP3 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNNQ9UQP3 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
TNNQ9UQP3 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNNQ9UQP3 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNNQ9UQP3 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TNNQ9UQP3 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNNQ9UQP3 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNNQ9UQP3 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC19.2■□□□□ 0.66
TNNQ9UQP3 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC19.2■□□□□ 0.66
TNNQ9UQP3 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNNQ9UQP3 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC19.2■□□□□ 0.66
TNNQ9UQP3 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC19.2■□□□□ 0.66
TNNQ9UQP3 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC19.2■□□□□ 0.66
TNNQ9UQP3 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC19.2■□□□□ 0.66
TNNQ9UQP3 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC19.2■□□□□ 0.66
TNNQ9UQP3 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNNQ9UQP3 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
TNNQ9UQP3 AC114812.1-204ENST00000449669 728 ntBASIC19.2■□□□□ 0.66
TNNQ9UQP3 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC19.2■□□□□ 0.66
TNNQ9UQP3 FO681548.1-201ENST00000455617 1132 ntBASIC19.2■□□□□ 0.66
TNNQ9UQP3 RN7SL752P-201ENST00000463779 287 ntBASIC19.2■□□□□ 0.66
TNNQ9UQP3 AC022616.1-201ENST00000518688 554 ntBASIC19.2■□□□□ 0.66
TNNQ9UQP3 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TNNQ9UQP3 AC008735.3-201ENST00000596646 500 ntBASIC19.2■□□□□ 0.66
TNNQ9UQP3 LINC02084-201ENST00000606069 1096 ntBASIC19.2■□□□□ 0.66
TNNQ9UQP3 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TNNQ9UQP3 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC19.2■□□□□ 0.66
TNNQ9UQP3 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TNNQ9UQP3 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
TNNQ9UQP3 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
TNNQ9UQP3 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TNNQ9UQP3 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC19.2■□□□□ 0.66
TNNQ9UQP3 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNNQ9UQP3 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TNNQ9UQP3 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNNQ9UQP3 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNNQ9UQP3 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
TNNQ9UQP3 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TNNQ9UQP3 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNNQ9UQP3 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNNQ9UQP3 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TNNQ9UQP3 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNNQ9UQP3 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TNNQ9UQP3 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
TNNQ9UQP3 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNNQ9UQP3 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNNQ9UQP3 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC19.19■□□□□ 0.66
TNNQ9UQP3 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNNQ9UQP3 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
TNNQ9UQP3 BAATP1-201ENST00000412284 1225 ntBASIC19.19■□□□□ 0.66
TNNQ9UQP3 RPL28-203ENST00000428193 573 ntTSL 2 BASIC19.19■□□□□ 0.66
TNNQ9UQP3 RPL28-204ENST00000431533 590 ntTSL 2 BASIC19.19■□□□□ 0.66
TNNQ9UQP3 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC19.19■□□□□ 0.66
TNNQ9UQP3 AC068587.3-201ENST00000526613 355 ntBASIC19.19■□□□□ 0.66
TNNQ9UQP3 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TNNQ9UQP3 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC19.19■□□□□ 0.66
TNNQ9UQP3 RPL28-207ENST00000558815 616 ntTSL 2 BASIC19.19■□□□□ 0.66
TNNQ9UQP3 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
TNNQ9UQP3 RPS15-202ENST00000585665 467 ntTSL 3 BASIC19.19■□□□□ 0.66
TNNQ9UQP3 AC244669.2-201ENST00000612320 853 ntBASIC19.19■□□□□ 0.66
TNNQ9UQP3 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC19.19■□□□□ 0.66
TNNQ9UQP3 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
TNNQ9UQP3 AC105233.6-201ENST00000642093 218 ntBASIC19.19■□□□□ 0.66
TNNQ9UQP3 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNNQ9UQP3 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TNNQ9UQP3 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNNQ9UQP3 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNNQ9UQP3 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
TNNQ9UQP3 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNNQ9UQP3 UCKL1-AS1-201ENST00000623569 3602 ntBASIC19.19■□□□□ 0.66
TNNQ9UQP3 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
TNNQ9UQP3 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC19.18■□□□□ 0.66
TNNQ9UQP3 AC020910.5-201ENST00000623668 1865 ntBASIC19.18■□□□□ 0.66
TNNQ9UQP3 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms