Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 RNU1-114P-201ENST00000365297 166 ntBASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 IGHV3-72-202ENST00000621503 303 ntBASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 LILRP1-201ENST00000444199 1370 ntBASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
KCMF1Q9P0J7 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.41□□□□□ -0.1
KCMF1Q9P0J7 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
KCMF1Q9P0J7 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
KCMF1Q9P0J7 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
KCMF1Q9P0J7 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
KCMF1Q9P0J7 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.41□□□□□ -0.1
KCMF1Q9P0J7 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
KCMF1Q9P0J7 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.41□□□□□ -0.1
KCMF1Q9P0J7 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
KCMF1Q9P0J7 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KCMF1Q9P0J7 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
KCMF1Q9P0J7 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
KCMF1Q9P0J7 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.41□□□□□ -0.1
KCMF1Q9P0J7 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.41□□□□□ -0.1
KCMF1Q9P0J7 KLF2P2-201ENST00000416807 1039 ntBASIC14.41□□□□□ -0.1
KCMF1Q9P0J7 GIMAP3P-201ENST00000495150 836 ntBASIC14.41□□□□□ -0.1
KCMF1Q9P0J7 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
KCMF1Q9P0J7 AC022137.2-201ENST00000503482 481 ntBASIC14.41□□□□□ -0.1
KCMF1Q9P0J7 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.41□□□□□ -0.1
KCMF1Q9P0J7 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
KCMF1Q9P0J7 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.41□□□□□ -0.1
KCMF1Q9P0J7 AC009486.1-201ENST00000569860 813 ntBASIC14.41□□□□□ -0.1
KCMF1Q9P0J7 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.41□□□□□ -0.1
KCMF1Q9P0J7 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms