Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC10Q9NYD6 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC10Q9NYD6 AL008718.2-201ENST00000609206 1313 ntBASIC17.21■□□□□ 0.35
HOXC10Q9NYD6 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC17.21■□□□□ 0.35
HOXC10Q9NYD6 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HOXC10Q9NYD6 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC17.21■□□□□ 0.35
HOXC10Q9NYD6 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HOXC10Q9NYD6 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HOXC10Q9NYD6 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HOXC10Q9NYD6 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC17.21■□□□□ 0.35
HOXC10Q9NYD6 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HOXC10Q9NYD6 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HOXC10Q9NYD6 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HOXC10Q9NYD6 AC244394.1-201ENST00000435000 1665 ntBASIC17.21■□□□□ 0.35
HOXC10Q9NYD6 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
HOXC10Q9NYD6 CMC1-204ENST00000423894 549 ntTSL 2 BASIC17.21■□□□□ 0.35
HOXC10Q9NYD6 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
HOXC10Q9NYD6 AL160314.3-201ENST00000556041 767 ntBASIC17.21■□□□□ 0.35
HOXC10Q9NYD6 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
HOXC10Q9NYD6 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
HOXC10Q9NYD6 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.21■□□□□ 0.35
HOXC10Q9NYD6 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HOXC10Q9NYD6 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
HOXC10Q9NYD6 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HOXC10Q9NYD6 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HOXC10Q9NYD6 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HOXC10Q9NYD6 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC17.21■□□□□ 0.35
HOXC10Q9NYD6 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
HOXC10Q9NYD6 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
HOXC10Q9NYD6 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC17.21■□□□□ 0.34
HOXC10Q9NYD6 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
HOXC10Q9NYD6 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
HOXC10Q9NYD6 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HOXC10Q9NYD6 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
HOXC10Q9NYD6 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
HOXC10Q9NYD6 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HOXC10Q9NYD6 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.2■□□□□ 0.34
HOXC10Q9NYD6 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HOXC10Q9NYD6 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HOXC10Q9NYD6 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HOXC10Q9NYD6 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.2■□□□□ 0.34
HOXC10Q9NYD6 AP000845.1-201ENST00000581677 2131 ntBASIC17.2■□□□□ 0.34
HOXC10Q9NYD6 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HOXC10Q9NYD6 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HOXC10Q9NYD6 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HOXC10Q9NYD6 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HOXC10Q9NYD6 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HOXC10Q9NYD6 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
HOXC10Q9NYD6 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
HOXC10Q9NYD6 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HOXC10Q9NYD6 AL596276.2-201ENST00000447525 331 ntBASIC17.2■□□□□ 0.34
HOXC10Q9NYD6 TMEM198B-204ENST00000484016 896 ntBASIC17.2■□□□□ 0.34
HOXC10Q9NYD6 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HOXC10Q9NYD6 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
HOXC10Q9NYD6 AC008805.1-201ENST00000590892 364 ntBASIC17.2■□□□□ 0.34
HOXC10Q9NYD6 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC17.2■□□□□ 0.34
HOXC10Q9NYD6 AC128714.1-201ENST00000637035 887 ntBASIC17.2■□□□□ 0.34
HOXC10Q9NYD6 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC17.2■□□□□ 0.34
HOXC10Q9NYD6 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HOXC10Q9NYD6 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HOXC10Q9NYD6 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
HOXC10Q9NYD6 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HOXC10Q9NYD6 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
HOXC10Q9NYD6 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HOXC10Q9NYD6 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HOXC10Q9NYD6 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.2■□□□□ 0.34
HOXC10Q9NYD6 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HOXC10Q9NYD6 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
HOXC10Q9NYD6 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.19■□□□□ 0.34
HOXC10Q9NYD6 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HOXC10Q9NYD6 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HOXC10Q9NYD6 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
HOXC10Q9NYD6 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
HOXC10Q9NYD6 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
HOXC10Q9NYD6 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
HOXC10Q9NYD6 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.19■□□□□ 0.34
HOXC10Q9NYD6 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC17.19■□□□□ 0.34
HOXC10Q9NYD6 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HOXC10Q9NYD6 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HOXC10Q9NYD6 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HOXC10Q9NYD6 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HOXC10Q9NYD6 HNRNPA1P41-201ENST00000397777 928 ntBASIC17.19■□□□□ 0.34
HOXC10Q9NYD6 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC17.19■□□□□ 0.34
HOXC10Q9NYD6 AC007274.2-201ENST00000421675 662 ntBASIC17.19■□□□□ 0.34
HOXC10Q9NYD6 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HOXC10Q9NYD6 SKA2-202ENST00000437036 625 ntTSL 2 BASIC17.19■□□□□ 0.34
HOXC10Q9NYD6 VDAC1P1-201ENST00000439229 848 ntBASIC17.19■□□□□ 0.34
HOXC10Q9NYD6 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC17.19■□□□□ 0.34
HOXC10Q9NYD6 KLF2P1-201ENST00000447438 1042 ntBASIC17.19■□□□□ 0.34
HOXC10Q9NYD6 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC17.19■□□□□ 0.34
HOXC10Q9NYD6 AL353637.1-201ENST00000451571 732 ntBASIC17.19■□□□□ 0.34
HOXC10Q9NYD6 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC17.19■□□□□ 0.34
HOXC10Q9NYD6 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC17.19■□□□□ 0.34
HOXC10Q9NYD6 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC17.19■□□□□ 0.34
HOXC10Q9NYD6 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
HOXC10Q9NYD6 AC009779.1-201ENST00000551138 283 ntBASIC17.19■□□□□ 0.34
HOXC10Q9NYD6 CENPX-208ENST00000584347 799 ntTSL 2 BASIC17.19■□□□□ 0.34
HOXC10Q9NYD6 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
HOXC10Q9NYD6 AC027601.3-201ENST00000622907 509 ntBASIC17.19■□□□□ 0.34
HOXC10Q9NYD6 NAP1L6-202ENST00000641404 1222 ntBASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms