Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC21.29■■□□□ 1
SLC52A1Q9NWF4 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC21.29■■□□□ 1
SLC52A1Q9NWF4 CES3-203ENST00000543856 3178 ntTSL 2 BASIC21.29■■□□□ 1
SLC52A1Q9NWF4 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC21.29■■□□□ 1
SLC52A1Q9NWF4 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC21.29■■□□□ 1
SLC52A1Q9NWF4 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SLC52A1Q9NWF4 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SLC52A1Q9NWF4 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC21.29■■□□□ 1
SLC52A1Q9NWF4 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
SLC52A1Q9NWF4 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC21.28■■□□□ 1
SLC52A1Q9NWF4 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC21.28■■□□□ 1
SLC52A1Q9NWF4 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC21.28■■□□□ 1
SLC52A1Q9NWF4 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
SLC52A1Q9NWF4 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
SLC52A1Q9NWF4 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SLC52A1Q9NWF4 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLC52A1Q9NWF4 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLC52A1Q9NWF4 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLC52A1Q9NWF4 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC21.28■■□□□ 1
SLC52A1Q9NWF4 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
SLC52A1Q9NWF4 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC21.28■■□□□ 1
SLC52A1Q9NWF4 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC21.28■■□□□ 1
SLC52A1Q9NWF4 LYPLA2P1-203ENST00000447689 696 ntBASIC21.28■■□□□ 1
SLC52A1Q9NWF4 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC21.28■■□□□ 1
SLC52A1Q9NWF4 RHEB-207ENST00000496004 744 ntTSL 2 BASIC21.28■■□□□ 1
SLC52A1Q9NWF4 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC21.28■■□□□ 1
SLC52A1Q9NWF4 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC21.28■■□□□ 1
SLC52A1Q9NWF4 AC013726.1-201ENST00000563747 2285 ntBASIC21.28■■□□□ 1
SLC52A1Q9NWF4 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC21.28■■□□□ 1
SLC52A1Q9NWF4 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC21.28■■□□□ 1
SLC52A1Q9NWF4 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC21.28■■□□□ 1
SLC52A1Q9NWF4 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
SLC52A1Q9NWF4 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC21.28■■□□□ 1
SLC52A1Q9NWF4 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLC52A1Q9NWF4 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC21.28■■□□□ 1
SLC52A1Q9NWF4 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
SLC52A1Q9NWF4 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC21.28■■□□□ 1
SLC52A1Q9NWF4 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
SLC52A1Q9NWF4 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SLC52A1Q9NWF4 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC21.28■■□□□ 1
SLC52A1Q9NWF4 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC21.28■■□□□ 1
SLC52A1Q9NWF4 BANP-204ENST00000393208 2283 ntTSL 2 BASIC21.27■■□□□ 1
SLC52A1Q9NWF4 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SLC52A1Q9NWF4 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SLC52A1Q9NWF4 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC21.27■■□□□ 1
SLC52A1Q9NWF4 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
SLC52A1Q9NWF4 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC21.27■■□□□ 1
SLC52A1Q9NWF4 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SLC52A1Q9NWF4 LINC02199-201ENST00000506655 2702 ntBASIC21.27■■□□□ 1
SLC52A1Q9NWF4 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC21.27■■□□□ 1
SLC52A1Q9NWF4 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
SLC52A1Q9NWF4 OR2R1P-201ENST00000441404 914 ntBASIC21.27■■□□□ 1
SLC52A1Q9NWF4 AC018463.1-201ENST00000456674 917 ntBASIC21.27■■□□□ 1
SLC52A1Q9NWF4 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
SLC52A1Q9NWF4 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC21.27■■□□□ 1
SLC52A1Q9NWF4 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
SLC52A1Q9NWF4 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC21.27■■□□□ 1
SLC52A1Q9NWF4 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC21.27■■□□□ 1
SLC52A1Q9NWF4 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC21.27■■□□□ 1
SLC52A1Q9NWF4 AC084781.1-201ENST00000613737 656 ntBASIC21.27■■□□□ 1
SLC52A1Q9NWF4 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SLC52A1Q9NWF4 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC21.27■■□□□ 1
SLC52A1Q9NWF4 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SLC52A1Q9NWF4 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
SLC52A1Q9NWF4 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SLC52A1Q9NWF4 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SLC52A1Q9NWF4 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC21.27■■□□□ 1
SLC52A1Q9NWF4 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC21.27■■□□□ 1
SLC52A1Q9NWF4 AL590440.2-201ENST00000641973 1595 ntBASIC21.27■□□□□ 0.99
SLC52A1Q9NWF4 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
SLC52A1Q9NWF4 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
SLC52A1Q9NWF4 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
SLC52A1Q9NWF4 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
SLC52A1Q9NWF4 AC020658.6-201ENST00000623564 1870 ntBASIC21.26■□□□□ 0.99
SLC52A1Q9NWF4 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SLC52A1Q9NWF4 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
SLC52A1Q9NWF4 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
SLC52A1Q9NWF4 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SLC52A1Q9NWF4 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SLC52A1Q9NWF4 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC21.26■□□□□ 0.99
SLC52A1Q9NWF4 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC21.26■□□□□ 0.99
SLC52A1Q9NWF4 AC012362.1-201ENST00000434906 739 ntBASIC21.26■□□□□ 0.99
SLC52A1Q9NWF4 PIN4P1-201ENST00000451079 396 ntBASIC21.26■□□□□ 0.99
SLC52A1Q9NWF4 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC21.26■□□□□ 0.99
SLC52A1Q9NWF4 ORAOV1P1-201ENST00000503108 395 ntBASIC21.26■□□□□ 0.99
SLC52A1Q9NWF4 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC21.26■□□□□ 0.99
SLC52A1Q9NWF4 AC007326.1-201ENST00000604539 458 ntBASIC21.26■□□□□ 0.99
SLC52A1Q9NWF4 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
SLC52A1Q9NWF4 AL161773.1-201ENST00000624845 863 ntBASIC21.26■□□□□ 0.99
SLC52A1Q9NWF4 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC21.26■□□□□ 0.99
SLC52A1Q9NWF4 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
SLC52A1Q9NWF4 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SLC52A1Q9NWF4 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC21.26■□□□□ 0.99
SLC52A1Q9NWF4 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC21.26■□□□□ 0.99
SLC52A1Q9NWF4 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC21.26■□□□□ 0.99
SLC52A1Q9NWF4 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC52A1Q9NWF4 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SLC52A1Q9NWF4 AC087481.3-201ENST00000602886 1894 ntBASIC21.26■□□□□ 0.99
SLC52A1Q9NWF4 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC52A1Q9NWF4 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms