Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.16■□□□□ 0.5
RTN4Q9NQC3 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTN4Q9NQC3 AC025062.2-201ENST00000605477 670 ntBASIC18.16■□□□□ 0.5
RTN4Q9NQC3 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.16■□□□□ 0.5
RTN4Q9NQC3 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.16■□□□□ 0.5
RTN4Q9NQC3 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC18.16■□□□□ 0.5
RTN4Q9NQC3 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
RTN4Q9NQC3 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTN4Q9NQC3 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.16■□□□□ 0.5
RTN4Q9NQC3 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTN4Q9NQC3 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RTN4Q9NQC3 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC18.16■□□□□ 0.5
RTN4Q9NQC3 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTN4Q9NQC3 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC18.16■□□□□ 0.5
RTN4Q9NQC3 FES-203ENST00000394302 2133 ntTSL 5 BASIC18.16■□□□□ 0.5
RTN4Q9NQC3 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC18.16■□□□□ 0.5
RTN4Q9NQC3 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
RTN4Q9NQC3 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTN4Q9NQC3 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC18.16■□□□□ 0.5
RTN4Q9NQC3 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
RTN4Q9NQC3 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTN4Q9NQC3 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC18.15■□□□□ 0.5
RTN4Q9NQC3 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RTN4Q9NQC3 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.15■□□□□ 0.5
RTN4Q9NQC3 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RTN4Q9NQC3 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
RTN4Q9NQC3 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RTN4Q9NQC3 DDX24-202ENST00000544005 2214 ntTSL 2 BASIC18.15■□□□□ 0.5
RTN4Q9NQC3 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTN4Q9NQC3 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTN4Q9NQC3 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTN4Q9NQC3 CD226-207ENST00000582621 1458 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTN4Q9NQC3 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RTN4Q9NQC3 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTN4Q9NQC3 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTN4Q9NQC3 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RTN4Q9NQC3 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTN4Q9NQC3 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTN4Q9NQC3 CWC25-202ENST00000614790 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTN4Q9NQC3 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.15■□□□□ 0.5
RTN4Q9NQC3 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.15■□□□□ 0.5
RTN4Q9NQC3 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.15■□□□□ 0.5
RTN4Q9NQC3 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTN4Q9NQC3 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.15■□□□□ 0.5
RTN4Q9NQC3 LINC01513-201ENST00000416930 483 ntTSL 2 BASIC18.15■□□□□ 0.5
RTN4Q9NQC3 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.15■□□□□ 0.5
RTN4Q9NQC3 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.15■□□□□ 0.5
RTN4Q9NQC3 KRT18P31-201ENST00000506277 1292 ntBASIC18.15■□□□□ 0.5
RTN4Q9NQC3 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.15■□□□□ 0.5
RTN4Q9NQC3 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RTN4Q9NQC3 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.15■□□□□ 0.5
RTN4Q9NQC3 AC087641.1-201ENST00000557561 1021 ntBASIC18.15■□□□□ 0.5
RTN4Q9NQC3 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.15■□□□□ 0.5
RTN4Q9NQC3 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.15■□□□□ 0.5
RTN4Q9NQC3 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.15■□□□□ 0.5
RTN4Q9NQC3 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC18.15■□□□□ 0.5
RTN4Q9NQC3 AC008608.2-201ENST00000606089 416 ntBASIC18.15■□□□□ 0.5
RTN4Q9NQC3 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.15■□□□□ 0.5
RTN4Q9NQC3 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTN4Q9NQC3 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.15■□□□□ 0.5
RTN4Q9NQC3 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RTN4Q9NQC3 AC093458.2-201ENST00000623150 629 ntBASIC18.15■□□□□ 0.5
RTN4Q9NQC3 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.15■□□□□ 0.5
RTN4Q9NQC3 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTN4Q9NQC3 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTN4Q9NQC3 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RTN4Q9NQC3 FCGR3A-206ENST00000443193 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTN4Q9NQC3 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTN4Q9NQC3 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTN4Q9NQC3 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
RTN4Q9NQC3 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTN4Q9NQC3 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
RTN4Q9NQC3 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.14■□□□□ 0.5
RTN4Q9NQC3 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
RTN4Q9NQC3 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RTN4Q9NQC3 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RTN4Q9NQC3 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTN4Q9NQC3 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC18.14■□□□□ 0.49
RTN4Q9NQC3 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC18.14■□□□□ 0.49
RTN4Q9NQC3 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RTN4Q9NQC3 AL591122.2-201ENST00000624125 1853 ntBASIC18.14■□□□□ 0.49
RTN4Q9NQC3 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTN4Q9NQC3 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTN4Q9NQC3 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RTN4Q9NQC3 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.14■□□□□ 0.49
RTN4Q9NQC3 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC18.14■□□□□ 0.49
RTN4Q9NQC3 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RTN4Q9NQC3 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC18.14■□□□□ 0.49
RTN4Q9NQC3 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTN4Q9NQC3 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC18.14■□□□□ 0.49
RTN4Q9NQC3 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RTN4Q9NQC3 KRT18P35-201ENST00000510488 1269 ntBASIC18.14■□□□□ 0.49
RTN4Q9NQC3 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.14■□□□□ 0.49
RTN4Q9NQC3 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.14■□□□□ 0.49
RTN4Q9NQC3 AL669831.3-208ENST00000634337 891 ntTSL 5 BASIC18.14■□□□□ 0.49
RTN4Q9NQC3 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RTN4Q9NQC3 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTN4Q9NQC3 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RTN4Q9NQC3 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTN4Q9NQC3 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms