Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
GCM1Q9NP62 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
GCM1Q9NP62 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.03□□□□□ -0.32
GCM1Q9NP62 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC13.03□□□□□ -0.32
GCM1Q9NP62 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC13.03□□□□□ -0.32
GCM1Q9NP62 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
GCM1Q9NP62 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
GCM1Q9NP62 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
GCM1Q9NP62 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.03□□□□□ -0.32
GCM1Q9NP62 AL512384.1-201ENST00000406683 331 ntBASIC13.03□□□□□ -0.32
GCM1Q9NP62 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
GCM1Q9NP62 GSAP-205ENST00000430584 600 ntTSL 5 BASIC13.03□□□□□ -0.32
GCM1Q9NP62 GAPDHP21-201ENST00000450301 1010 ntBASIC13.03□□□□□ -0.32
GCM1Q9NP62 RN7SL837P-201ENST00000463010 287 ntBASIC13.03□□□□□ -0.32
GCM1Q9NP62 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.03□□□□□ -0.32
GCM1Q9NP62 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC13.03□□□□□ -0.32
GCM1Q9NP62 RBM7-207ENST00000544582 692 ntTSL 3 BASIC13.03□□□□□ -0.32
GCM1Q9NP62 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.03□□□□□ -0.32
GCM1Q9NP62 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.03□□□□□ -0.32
GCM1Q9NP62 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.03□□□□□ -0.32
GCM1Q9NP62 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13.03□□□□□ -0.32
GCM1Q9NP62 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
GCM1Q9NP62 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.03□□□□□ -0.32
GCM1Q9NP62 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
GCM1Q9NP62 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
GCM1Q9NP62 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
GCM1Q9NP62 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.03□□□□□ -0.32
GCM1Q9NP62 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
GCM1Q9NP62 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
GCM1Q9NP62 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
GCM1Q9NP62 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.03□□□□□ -0.32
GCM1Q9NP62 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
GCM1Q9NP62 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
GCM1Q9NP62 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
GCM1Q9NP62 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.03□□□□□ -0.32
GCM1Q9NP62 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
GCM1Q9NP62 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
GCM1Q9NP62 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
GCM1Q9NP62 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
GCM1Q9NP62 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.02□□□□□ -0.32
GCM1Q9NP62 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
GCM1Q9NP62 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.02□□□□□ -0.32
GCM1Q9NP62 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
GCM1Q9NP62 PPT1-215ENST00000641471 2368 ntBASIC13.02□□□□□ -0.32
GCM1Q9NP62 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
GCM1Q9NP62 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
GCM1Q9NP62 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
GCM1Q9NP62 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
GCM1Q9NP62 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
GCM1Q9NP62 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
GCM1Q9NP62 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
GCM1Q9NP62 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
GCM1Q9NP62 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
GCM1Q9NP62 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
GCM1Q9NP62 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.02□□□□□ -0.33
GCM1Q9NP62 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
GCM1Q9NP62 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
GCM1Q9NP62 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.02□□□□□ -0.33
GCM1Q9NP62 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
GCM1Q9NP62 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.02□□□□□ -0.33
GCM1Q9NP62 AC005034.1-201ENST00000426657 489 ntBASIC13.02□□□□□ -0.33
GCM1Q9NP62 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
GCM1Q9NP62 KRT17P7-201ENST00000451704 1104 ntBASIC13.02□□□□□ -0.33
GCM1Q9NP62 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.02□□□□□ -0.33
GCM1Q9NP62 AC004066.1-201ENST00000502488 802 ntBASIC13.02□□□□□ -0.33
GCM1Q9NP62 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
GCM1Q9NP62 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.02□□□□□ -0.33
GCM1Q9NP62 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
GCM1Q9NP62 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.02□□□□□ -0.33
GCM1Q9NP62 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.02□□□□□ -0.33
GCM1Q9NP62 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC13.02□□□□□ -0.33
GCM1Q9NP62 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC13.02□□□□□ -0.33
GCM1Q9NP62 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
GCM1Q9NP62 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
GCM1Q9NP62 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.02□□□□□ -0.33
GCM1Q9NP62 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
GCM1Q9NP62 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
GCM1Q9NP62 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
GCM1Q9NP62 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.02□□□□□ -0.33
GCM1Q9NP62 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
GCM1Q9NP62 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
GCM1Q9NP62 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
GCM1Q9NP62 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
GCM1Q9NP62 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
GCM1Q9NP62 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.02□□□□□ -0.33
GCM1Q9NP62 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
GCM1Q9NP62 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
GCM1Q9NP62 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
GCM1Q9NP62 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
GCM1Q9NP62 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
GCM1Q9NP62 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.02□□□□□ -0.33
GCM1Q9NP62 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
GCM1Q9NP62 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
GCM1Q9NP62 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
GCM1Q9NP62 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
GCM1Q9NP62 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
GCM1Q9NP62 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
GCM1Q9NP62 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
GCM1Q9NP62 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.01□□□□□ -0.33
GCM1Q9NP62 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms