Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CD248Q9HCU0 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC16.07■□□□□ 0.16
CD248Q9HCU0 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.07■□□□□ 0.16
CD248Q9HCU0 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CD248Q9HCU0 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.07■□□□□ 0.16
CD248Q9HCU0 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.07■□□□□ 0.16
CD248Q9HCU0 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.07■□□□□ 0.16
CD248Q9HCU0 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CD248Q9HCU0 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.07■□□□□ 0.16
CD248Q9HCU0 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.07■□□□□ 0.16
CD248Q9HCU0 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.07■□□□□ 0.16
CD248Q9HCU0 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC16.07■□□□□ 0.16
CD248Q9HCU0 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.07■□□□□ 0.16
CD248Q9HCU0 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.07■□□□□ 0.16
CD248Q9HCU0 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
CD248Q9HCU0 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
CD248Q9HCU0 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CD248Q9HCU0 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CD248Q9HCU0 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.07■□□□□ 0.16
CD248Q9HCU0 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CD248Q9HCU0 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CD248Q9HCU0 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CD248Q9HCU0 OS9-204ENST00000389146 2091 ntTSL 2 BASIC16.07■□□□□ 0.16
CD248Q9HCU0 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.07■□□□□ 0.16
CD248Q9HCU0 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.07■□□□□ 0.16
CD248Q9HCU0 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CD248Q9HCU0 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.07■□□□□ 0.16
CD248Q9HCU0 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CD248Q9HCU0 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CD248Q9HCU0 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CD248Q9HCU0 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CD248Q9HCU0 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
CD248Q9HCU0 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CD248Q9HCU0 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
CD248Q9HCU0 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CD248Q9HCU0 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CD248Q9HCU0 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD248Q9HCU0 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD248Q9HCU0 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CD248Q9HCU0 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD248Q9HCU0 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD248Q9HCU0 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD248Q9HCU0 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD248Q9HCU0 AC013726.1-201ENST00000563747 2285 ntBASIC16.06■□□□□ 0.16
CD248Q9HCU0 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CD248Q9HCU0 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.06■□□□□ 0.16
CD248Q9HCU0 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.06■□□□□ 0.16
CD248Q9HCU0 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.06■□□□□ 0.16
CD248Q9HCU0 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.06■□□□□ 0.16
CD248Q9HCU0 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.06■□□□□ 0.16
CD248Q9HCU0 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CD248Q9HCU0 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD248Q9HCU0 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD248Q9HCU0 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD248Q9HCU0 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD248Q9HCU0 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CD248Q9HCU0 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD248Q9HCU0 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD248Q9HCU0 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CD248Q9HCU0 ANKRD19P-201ENST00000338192 862 ntBASIC16.06■□□□□ 0.16
CD248Q9HCU0 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
CD248Q9HCU0 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD248Q9HCU0 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.06■□□□□ 0.16
CD248Q9HCU0 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.06■□□□□ 0.16
CD248Q9HCU0 AC015936.2-201ENST00000593177 259 ntBASIC16.06■□□□□ 0.16
CD248Q9HCU0 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD248Q9HCU0 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CD248Q9HCU0 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.06■□□□□ 0.16
CD248Q9HCU0 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD248Q9HCU0 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD248Q9HCU0 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD248Q9HCU0 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD248Q9HCU0 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD248Q9HCU0 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD248Q9HCU0 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC16.06■□□□□ 0.16
CD248Q9HCU0 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
CD248Q9HCU0 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD248Q9HCU0 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD248Q9HCU0 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD248Q9HCU0 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
CD248Q9HCU0 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CD248Q9HCU0 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CD248Q9HCU0 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CD248Q9HCU0 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD248Q9HCU0 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.05■□□□□ 0.16
CD248Q9HCU0 REXO1L8P-201ENST00000604378 1897 ntBASIC16.05■□□□□ 0.16
CD248Q9HCU0 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CD248Q9HCU0 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.05■□□□□ 0.16
CD248Q9HCU0 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CD248Q9HCU0 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD248Q9HCU0 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.05■□□□□ 0.16
CD248Q9HCU0 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CD248Q9HCU0 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD248Q9HCU0 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
CD248Q9HCU0 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD248Q9HCU0 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD248Q9HCU0 AC027601.5-201ENST00000624065 2482 ntBASIC16.05■□□□□ 0.16
CD248Q9HCU0 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.05■□□□□ 0.16
CD248Q9HCU0 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD248Q9HCU0 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms