Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
USB1Q9BQ65 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.76□□□□□ -0.21
USB1Q9BQ65 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
USB1Q9BQ65 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
USB1Q9BQ65 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
USB1Q9BQ65 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
USB1Q9BQ65 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
USB1Q9BQ65 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
USB1Q9BQ65 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
USB1Q9BQ65 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
USB1Q9BQ65 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
USB1Q9BQ65 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
USB1Q9BQ65 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
USB1Q9BQ65 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
USB1Q9BQ65 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
USB1Q9BQ65 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.76□□□□□ -0.21
USB1Q9BQ65 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.76□□□□□ -0.21
USB1Q9BQ65 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.76□□□□□ -0.21
USB1Q9BQ65 AC007389.4-201ENST00000454674 793 ntBASIC13.76□□□□□ -0.21
USB1Q9BQ65 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.76□□□□□ -0.21
USB1Q9BQ65 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.76□□□□□ -0.21
USB1Q9BQ65 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.76□□□□□ -0.21
USB1Q9BQ65 ZNF93-205ENST00000591366 590 ntTSL 3 BASIC13.76□□□□□ -0.21
USB1Q9BQ65 AP001198.2-201ENST00000593121 466 ntTSL 2 BASIC13.76□□□□□ -0.21
USB1Q9BQ65 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
USB1Q9BQ65 AC000095.1-201ENST00000603208 874 ntBASIC13.76□□□□□ -0.21
USB1Q9BQ65 AC097359.3-201ENST00000603982 1210 ntBASIC13.76□□□□□ -0.21
USB1Q9BQ65 AC068313.1-201ENST00000604028 1008 ntBASIC13.76□□□□□ -0.21
USB1Q9BQ65 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.76□□□□□ -0.21
USB1Q9BQ65 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
USB1Q9BQ65 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.76□□□□□ -0.21
USB1Q9BQ65 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
USB1Q9BQ65 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.76□□□□□ -0.21
USB1Q9BQ65 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
USB1Q9BQ65 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
USB1Q9BQ65 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
USB1Q9BQ65 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
USB1Q9BQ65 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
USB1Q9BQ65 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
USB1Q9BQ65 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.75□□□□□ -0.21
USB1Q9BQ65 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
USB1Q9BQ65 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.75□□□□□ -0.21
USB1Q9BQ65 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
USB1Q9BQ65 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
USB1Q9BQ65 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
USB1Q9BQ65 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
USB1Q9BQ65 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
USB1Q9BQ65 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
USB1Q9BQ65 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
USB1Q9BQ65 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
USB1Q9BQ65 CLK3P2-201ENST00000427566 1453 ntBASIC13.75□□□□□ -0.21
USB1Q9BQ65 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
USB1Q9BQ65 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
USB1Q9BQ65 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
USB1Q9BQ65 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
USB1Q9BQ65 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
USB1Q9BQ65 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
USB1Q9BQ65 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC13.75□□□□□ -0.21
USB1Q9BQ65 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
USB1Q9BQ65 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
USB1Q9BQ65 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
USB1Q9BQ65 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
USB1Q9BQ65 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
USB1Q9BQ65 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
USB1Q9BQ65 COA1-202ENST00000310564 1085 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
USB1Q9BQ65 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
USB1Q9BQ65 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.75□□□□□ -0.21
USB1Q9BQ65 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
USB1Q9BQ65 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
USB1Q9BQ65 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.75□□□□□ -0.21
USB1Q9BQ65 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.75□□□□□ -0.21
USB1Q9BQ65 TPRG1-AS2-201ENST00000425454 479 ntTSL 5 BASIC13.75□□□□□ -0.21
USB1Q9BQ65 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC13.75□□□□□ -0.21
USB1Q9BQ65 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.75□□□□□ -0.21
USB1Q9BQ65 AC244107.1-201ENST00000442033 332 ntBASIC13.75□□□□□ -0.21
USB1Q9BQ65 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.75□□□□□ -0.21
USB1Q9BQ65 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
USB1Q9BQ65 AL589987.1-201ENST00000453380 819 ntBASIC13.75□□□□□ -0.21
USB1Q9BQ65 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
USB1Q9BQ65 FAM86LP-201ENST00000478302 853 ntBASIC13.75□□□□□ -0.21
USB1Q9BQ65 ELK1P1-201ENST00000485699 580 ntBASIC13.75□□□□□ -0.21
USB1Q9BQ65 GIMAP3P-201ENST00000495150 836 ntBASIC13.75□□□□□ -0.21
USB1Q9BQ65 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.75□□□□□ -0.21
USB1Q9BQ65 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC13.75□□□□□ -0.21
USB1Q9BQ65 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.75□□□□□ -0.21
USB1Q9BQ65 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.75□□□□□ -0.21
USB1Q9BQ65 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.75□□□□□ -0.21
USB1Q9BQ65 AC008567.2-201ENST00000589751 656 ntTSL 3 BASIC13.75□□□□□ -0.21
USB1Q9BQ65 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13.75□□□□□ -0.21
USB1Q9BQ65 AL033527.5-201ENST00000641382 801 ntBASIC13.75□□□□□ -0.21
USB1Q9BQ65 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
USB1Q9BQ65 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
USB1Q9BQ65 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
USB1Q9BQ65 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.75□□□□□ -0.21
USB1Q9BQ65 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
USB1Q9BQ65 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
USB1Q9BQ65 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
USB1Q9BQ65 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13.75□□□□□ -0.21
USB1Q9BQ65 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.75□□□□□ -0.21
USB1Q9BQ65 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms