Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
RAD9AQ99638 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAD9AQ99638 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAD9AQ99638 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
RAD9AQ99638 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RAD9AQ99638 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
RAD9AQ99638 CYP51A1P3-201ENST00000400072 1428 ntBASIC16.03■□□□□ 0.16
RAD9AQ99638 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAD9AQ99638 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAD9AQ99638 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.03■□□□□ 0.16
RAD9AQ99638 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAD9AQ99638 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAD9AQ99638 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC16.03■□□□□ 0.16
RAD9AQ99638 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RAD9AQ99638 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAD9AQ99638 AL662844.4-201ENST00000606367 2838 ntBASIC16.03■□□□□ 0.16
RAD9AQ99638 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.03■□□□□ 0.16
RAD9AQ99638 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAD9AQ99638 AC092127.1-201ENST00000567093 3455 ntBASIC16.03■□□□□ 0.16
RAD9AQ99638 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAD9AQ99638 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC16.03■□□□□ 0.16
RAD9AQ99638 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RAD9AQ99638 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC16.03■□□□□ 0.16
RAD9AQ99638 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC16.03■□□□□ 0.16
RAD9AQ99638 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC16.03■□□□□ 0.16
RAD9AQ99638 BUD31-205ENST00000456893 512 ntTSL 5 BASIC16.03■□□□□ 0.16
RAD9AQ99638 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC16.03■□□□□ 0.16
RAD9AQ99638 FOS-204ENST00000554617 796 ntTSL 2 BASIC16.03■□□□□ 0.16
RAD9AQ99638 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC16.03■□□□□ 0.16
RAD9AQ99638 MIR4649-201ENST00000582839 64 ntBASIC16.03■□□□□ 0.16
RAD9AQ99638 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC16.03■□□□□ 0.16
RAD9AQ99638 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC16.03■□□□□ 0.16
RAD9AQ99638 AL109837.1-201ENST00000603272 613 ntBASIC16.03■□□□□ 0.16
RAD9AQ99638 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC16.03■□□□□ 0.16
RAD9AQ99638 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC16.03■□□□□ 0.16
RAD9AQ99638 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAD9AQ99638 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAD9AQ99638 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAD9AQ99638 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAD9AQ99638 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
RAD9AQ99638 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
RAD9AQ99638 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAD9AQ99638 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.03■□□□□ 0.16
RAD9AQ99638 STK26-204ENST00000481105 1835 ntTSL 2 BASIC16.03■□□□□ 0.16
RAD9AQ99638 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAD9AQ99638 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAD9AQ99638 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RAD9AQ99638 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.03■□□□□ 0.16
RAD9AQ99638 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
RAD9AQ99638 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RAD9AQ99638 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
RAD9AQ99638 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RAD9AQ99638 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RAD9AQ99638 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.02■□□□□ 0.16
RAD9AQ99638 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAD9AQ99638 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RAD9AQ99638 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAD9AQ99638 NCR3-202ENST00000376071 541 ntTSL 5 BASIC16.02■□□□□ 0.16
RAD9AQ99638 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAD9AQ99638 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAD9AQ99638 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAD9AQ99638 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAD9AQ99638 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC16.02■□□□□ 0.16
RAD9AQ99638 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC16.02■□□□□ 0.16
RAD9AQ99638 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC16.02■□□□□ 0.16
RAD9AQ99638 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC16.02■□□□□ 0.16
RAD9AQ99638 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC16.02■□□□□ 0.16
RAD9AQ99638 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RAD9AQ99638 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.02■□□□□ 0.15
RAD9AQ99638 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RAD9AQ99638 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.02■□□□□ 0.15
RAD9AQ99638 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
RAD9AQ99638 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
RAD9AQ99638 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.02■□□□□ 0.15
RAD9AQ99638 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.15
RAD9AQ99638 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RAD9AQ99638 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.02■□□□□ 0.15
RAD9AQ99638 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC16.02■□□□□ 0.15
RAD9AQ99638 AC025271.4-201ENST00000621477 1726 ntBASIC16.02■□□□□ 0.15
RAD9AQ99638 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.02■□□□□ 0.15
RAD9AQ99638 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.02■□□□□ 0.15
RAD9AQ99638 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.02■□□□□ 0.15
RAD9AQ99638 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC16.02■□□□□ 0.15
RAD9AQ99638 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RAD9AQ99638 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RAD9AQ99638 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAD9AQ99638 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAD9AQ99638 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.01■□□□□ 0.15
RAD9AQ99638 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC16.01■□□□□ 0.15
RAD9AQ99638 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAD9AQ99638 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC16.01■□□□□ 0.15
RAD9AQ99638 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RAD9AQ99638 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAD9AQ99638 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.01■□□□□ 0.15
RAD9AQ99638 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAD9AQ99638 FRMPD2B-201ENST00000431305 1347 ntBASIC16.01■□□□□ 0.15
RAD9AQ99638 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RAD9AQ99638 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
RAD9AQ99638 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
RAD9AQ99638 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms