Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.72■□□□□ 0.11
CDK5RAP1Q96SZ6 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDK5RAP1Q96SZ6 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDK5RAP1Q96SZ6 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDK5RAP1Q96SZ6 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDK5RAP1Q96SZ6 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
CDK5RAP1Q96SZ6 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDK5RAP1Q96SZ6 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDK5RAP1Q96SZ6 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDK5RAP1Q96SZ6 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDK5RAP1Q96SZ6 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDK5RAP1Q96SZ6 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDK5RAP1Q96SZ6 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDK5RAP1Q96SZ6 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDK5RAP1Q96SZ6 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDK5RAP1Q96SZ6 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDK5RAP1Q96SZ6 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDK5RAP1Q96SZ6 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.72■□□□□ 0.11
CDK5RAP1Q96SZ6 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.72■□□□□ 0.11
CDK5RAP1Q96SZ6 COX5BP1-201ENST00000507622 393 ntBASIC15.72■□□□□ 0.11
CDK5RAP1Q96SZ6 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.72■□□□□ 0.11
CDK5RAP1Q96SZ6 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15.72■□□□□ 0.11
CDK5RAP1Q96SZ6 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC15.72■□□□□ 0.11
CDK5RAP1Q96SZ6 RN7SL713P-201ENST00000582127 302 ntBASIC15.72■□□□□ 0.11
CDK5RAP1Q96SZ6 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.72■□□□□ 0.11
CDK5RAP1Q96SZ6 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.72■□□□□ 0.11
CDK5RAP1Q96SZ6 ZACNP1-201ENST00000612259 710 ntBASIC15.72■□□□□ 0.11
CDK5RAP1Q96SZ6 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.72■□□□□ 0.11
CDK5RAP1Q96SZ6 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDK5RAP1Q96SZ6 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDK5RAP1Q96SZ6 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDK5RAP1Q96SZ6 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.72■□□□□ 0.11
CDK5RAP1Q96SZ6 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDK5RAP1Q96SZ6 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC15.72■□□□□ 0.11
CDK5RAP1Q96SZ6 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CDK5RAP1Q96SZ6 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDK5RAP1Q96SZ6 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CDK5RAP1Q96SZ6 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDK5RAP1Q96SZ6 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.71■□□□□ 0.11
CDK5RAP1Q96SZ6 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CDK5RAP1Q96SZ6 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
CDK5RAP1Q96SZ6 CLUHP2-201ENST00000426660 1303 ntBASIC15.71■□□□□ 0.11
CDK5RAP1Q96SZ6 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
CDK5RAP1Q96SZ6 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDK5RAP1Q96SZ6 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDK5RAP1Q96SZ6 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDK5RAP1Q96SZ6 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDK5RAP1Q96SZ6 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDK5RAP1Q96SZ6 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDK5RAP1Q96SZ6 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDK5RAP1Q96SZ6 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.71■□□□□ 0.11
CDK5RAP1Q96SZ6 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDK5RAP1Q96SZ6 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDK5RAP1Q96SZ6 LINC02228-204ENST00000642115 2962 ntBASIC15.71■□□□□ 0.11
CDK5RAP1Q96SZ6 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CDK5RAP1Q96SZ6 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDK5RAP1Q96SZ6 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDK5RAP1Q96SZ6 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDK5RAP1Q96SZ6 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDK5RAP1Q96SZ6 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDK5RAP1Q96SZ6 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.71■□□□□ 0.11
CDK5RAP1Q96SZ6 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDK5RAP1Q96SZ6 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
CDK5RAP1Q96SZ6 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.71■□□□□ 0.11
CDK5RAP1Q96SZ6 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.71■□□□□ 0.11
CDK5RAP1Q96SZ6 TLE1P1-201ENST00000422965 589 ntBASIC15.71■□□□□ 0.11
CDK5RAP1Q96SZ6 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDK5RAP1Q96SZ6 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC15.71■□□□□ 0.11
CDK5RAP1Q96SZ6 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.71■□□□□ 0.11
CDK5RAP1Q96SZ6 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDK5RAP1Q96SZ6 AC106820.3-201ENST00000561653 397 ntBASIC15.71■□□□□ 0.11
CDK5RAP1Q96SZ6 C2orf69P2-201ENST00000562032 1123 ntBASIC15.71■□□□□ 0.11
CDK5RAP1Q96SZ6 RN7SL560P-201ENST00000577943 264 ntBASIC15.71■□□□□ 0.11
CDK5RAP1Q96SZ6 OR10B1P-201ENST00000601666 907 ntBASIC15.71■□□□□ 0.11
CDK5RAP1Q96SZ6 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CDK5RAP1Q96SZ6 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.71■□□□□ 0.11
CDK5RAP1Q96SZ6 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.71■□□□□ 0.11
CDK5RAP1Q96SZ6 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.71■□□□□ 0.11
CDK5RAP1Q96SZ6 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDK5RAP1Q96SZ6 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDK5RAP1Q96SZ6 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.71■□□□□ 0.11
CDK5RAP1Q96SZ6 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.71■□□□□ 0.11
CDK5RAP1Q96SZ6 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.71■□□□□ 0.11
CDK5RAP1Q96SZ6 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDK5RAP1Q96SZ6 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDK5RAP1Q96SZ6 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CDK5RAP1Q96SZ6 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CDK5RAP1Q96SZ6 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.71■□□□□ 0.1
CDK5RAP1Q96SZ6 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CDK5RAP1Q96SZ6 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CDK5RAP1Q96SZ6 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
CDK5RAP1Q96SZ6 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDK5RAP1Q96SZ6 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.7■□□□□ 0.1
CDK5RAP1Q96SZ6 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDK5RAP1Q96SZ6 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CDK5RAP1Q96SZ6 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDK5RAP1Q96SZ6 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDK5RAP1Q96SZ6 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDK5RAP1Q96SZ6 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDK5RAP1Q96SZ6 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms