Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 AC018665.1-201ENST00000622927 1362 ntBASIC12.61□□□□□ -0.39
GAFA1Q96PS6 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 AC092933.1-201ENST00000393644 945 ntBASIC12.61□□□□□ -0.39
GAFA1Q96PS6 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 AC005034.1-201ENST00000426657 489 ntBASIC12.61□□□□□ -0.39
GAFA1Q96PS6 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 GNRHR2-203ENST00000581100 1187 ntBASIC12.61□□□□□ -0.39
GAFA1Q96PS6 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 AL022328.1-201ENST00000610050 478 ntBASIC12.61□□□□□ -0.39
GAFA1Q96PS6 AL035252.4-201ENST00000624174 288 ntBASIC12.61□□□□□ -0.39
GAFA1Q96PS6 AC013726.1-201ENST00000563747 2285 ntBASIC12.61□□□□□ -0.39
GAFA1Q96PS6 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 FOS-202ENST00000535987 1402 ntTSL 2 BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 AC023090.2-201ENST00000625182 2110 ntBASIC12.61□□□□□ -0.39
GAFA1Q96PS6 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 FGD5P1-202ENST00000614866 2498 ntBASIC12.61□□□□□ -0.39
GAFA1Q96PS6 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 AL138709.1-201ENST00000614840 1693 ntBASIC12.61□□□□□ -0.39
GAFA1Q96PS6 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC12.61□□□□□ -0.39
GAFA1Q96PS6 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC12.6□□□□□ -0.39
GAFA1Q96PS6 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
GAFA1Q96PS6 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
GAFA1Q96PS6 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC12.6□□□□□ -0.39
GAFA1Q96PS6 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
GAFA1Q96PS6 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC12.6□□□□□ -0.39
GAFA1Q96PS6 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
GAFA1Q96PS6 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.6□□□□□ -0.39
GAFA1Q96PS6 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
GAFA1Q96PS6 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
GAFA1Q96PS6 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
GAFA1Q96PS6 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
GAFA1Q96PS6 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
GAFA1Q96PS6 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC12.6□□□□□ -0.39
GAFA1Q96PS6 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC12.6□□□□□ -0.39
GAFA1Q96PS6 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC12.6□□□□□ -0.39
GAFA1Q96PS6 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
GAFA1Q96PS6 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
GAFA1Q96PS6 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
GAFA1Q96PS6 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
GAFA1Q96PS6 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC12.6□□□□□ -0.39
GAFA1Q96PS6 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC12.6□□□□□ -0.39
GAFA1Q96PS6 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
GAFA1Q96PS6 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC12.6□□□□□ -0.39
GAFA1Q96PS6 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
GAFA1Q96PS6 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
GAFA1Q96PS6 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC12.6□□□□□ -0.39
GAFA1Q96PS6 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC12.6□□□□□ -0.39
GAFA1Q96PS6 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
GAFA1Q96PS6 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
GAFA1Q96PS6 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC12.6□□□□□ -0.39
GAFA1Q96PS6 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
GAFA1Q96PS6 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC12.6□□□□□ -0.39
GAFA1Q96PS6 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC12.6□□□□□ -0.39
GAFA1Q96PS6 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC12.6□□□□□ -0.39
GAFA1Q96PS6 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC12.6□□□□□ -0.39
GAFA1Q96PS6 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC12.6□□□□□ -0.39
GAFA1Q96PS6 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC12.6□□□□□ -0.39
GAFA1Q96PS6 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms