Protein–RNA interactions for Protein: Q96MD7

C9orf85, Uncharacterized protein C9orf85, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85Q96MD7 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC11.03□□□□□ -0.64
C9orf85Q96MD7 AL158211.3-201ENST00000607385 239 ntBASIC11.03□□□□□ -0.64
C9orf85Q96MD7 AL391069.4-201ENST00000609583 481 ntBASIC11.03□□□□□ -0.64
C9orf85Q96MD7 AL596442.2-201ENST00000610240 980 ntBASIC11.03□□□□□ -0.64
C9orf85Q96MD7 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
C9orf85Q96MD7 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
C9orf85Q96MD7 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
C9orf85Q96MD7 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC11.03□□□□□ -0.64
C9orf85Q96MD7 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
C9orf85Q96MD7 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
C9orf85Q96MD7 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
C9orf85Q96MD7 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
C9orf85Q96MD7 AC104581.4-201ENST00000623126 3052 ntBASIC11.03□□□□□ -0.64
C9orf85Q96MD7 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
C9orf85Q96MD7 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
C9orf85Q96MD7 FES-203ENST00000394302 2133 ntTSL 5 BASIC11.03□□□□□ -0.64
C9orf85Q96MD7 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC11.03□□□□□ -0.64
C9orf85Q96MD7 AC093525.8-201ENST00000624099 1342 ntBASIC11.03□□□□□ -0.64
C9orf85Q96MD7 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
C9orf85Q96MD7 AL157414.3-201ENST00000624276 1954 ntBASIC11.03□□□□□ -0.64
C9orf85Q96MD7 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC11.03□□□□□ -0.64
C9orf85Q96MD7 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC11.03□□□□□ -0.64
C9orf85Q96MD7 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC11.03□□□□□ -0.64
C9orf85Q96MD7 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
C9orf85Q96MD7 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC11.03□□□□□ -0.64
C9orf85Q96MD7 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
C9orf85Q96MD7 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
C9orf85Q96MD7 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
C9orf85Q96MD7 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
C9orf85Q96MD7 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
C9orf85Q96MD7 AC027601.5-201ENST00000624065 2482 ntBASIC11.02□□□□□ -0.64
C9orf85Q96MD7 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
C9orf85Q96MD7 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
C9orf85Q96MD7 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC11.02□□□□□ -0.64
C9orf85Q96MD7 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
C9orf85Q96MD7 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.64
C9orf85Q96MD7 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC11.02□□□□□ -0.64
C9orf85Q96MD7 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
C9orf85Q96MD7 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
C9orf85Q96MD7 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.64
C9orf85Q96MD7 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.64
C9orf85Q96MD7 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC11.02□□□□□ -0.64
C9orf85Q96MD7 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC11.02□□□□□ -0.64
C9orf85Q96MD7 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC11.02□□□□□ -0.64
C9orf85Q96MD7 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
C9orf85Q96MD7 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
C9orf85Q96MD7 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
C9orf85Q96MD7 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
C9orf85Q96MD7 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
C9orf85Q96MD7 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
C9orf85Q96MD7 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
C9orf85Q96MD7 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC11.02□□□□□ -0.65
C9orf85Q96MD7 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
C9orf85Q96MD7 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
C9orf85Q96MD7 AC136759.1-202ENST00000530858 2194 ntBASIC11.02□□□□□ -0.65
C9orf85Q96MD7 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
C9orf85Q96MD7 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
C9orf85Q96MD7 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
C9orf85Q96MD7 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC11.02□□□□□ -0.65
C9orf85Q96MD7 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
C9orf85Q96MD7 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
C9orf85Q96MD7 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
C9orf85Q96MD7 AL645937.2-201ENST00000396808 931 ntBASIC11.02□□□□□ -0.65
C9orf85Q96MD7 HNRNPA3P1-201ENST00000401429 1139 ntBASIC11.02□□□□□ -0.65
C9orf85Q96MD7 MPV17-208ENST00000405076 603 ntTSL 5 BASIC11.02□□□□□ -0.65
C9orf85Q96MD7 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC11.02□□□□□ -0.65
C9orf85Q96MD7 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC11.02□□□□□ -0.65
C9orf85Q96MD7 HLA-K-203ENST00000430151 1046 ntBASIC11.02□□□□□ -0.65
C9orf85Q96MD7 HNRNPA3P5-201ENST00000455201 833 ntBASIC11.02□□□□□ -0.65
C9orf85Q96MD7 AC067863.1-201ENST00000494933 530 ntBASIC11.02□□□□□ -0.65
C9orf85Q96MD7 MEIS3P1-201ENST00000495167 958 ntBASIC11.02□□□□□ -0.65
C9orf85Q96MD7 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC11.02□□□□□ -0.65
C9orf85Q96MD7 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC11.02□□□□□ -0.65
C9orf85Q96MD7 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
C9orf85Q96MD7 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC11.02□□□□□ -0.65
C9orf85Q96MD7 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC11.02□□□□□ -0.65
C9orf85Q96MD7 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC11.02□□□□□ -0.65
C9orf85Q96MD7 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
C9orf85Q96MD7 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC11.02□□□□□ -0.65
C9orf85Q96MD7 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC11.02□□□□□ -0.65
C9orf85Q96MD7 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
C9orf85Q96MD7 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
C9orf85Q96MD7 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC11.02□□□□□ -0.65
C9orf85Q96MD7 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC11.02□□□□□ -0.65
C9orf85Q96MD7 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC11.02□□□□□ -0.65
C9orf85Q96MD7 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
C9orf85Q96MD7 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
C9orf85Q96MD7 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC11.02□□□□□ -0.65
C9orf85Q96MD7 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC11.02□□□□□ -0.65
C9orf85Q96MD7 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC11.02□□□□□ -0.65
C9orf85Q96MD7 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC11.02□□□□□ -0.65
C9orf85Q96MD7 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
C9orf85Q96MD7 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
C9orf85Q96MD7 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC11.02□□□□□ -0.65
C9orf85Q96MD7 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
C9orf85Q96MD7 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
C9orf85Q96MD7 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC11.02□□□□□ -0.65
C9orf85Q96MD7 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
C9orf85Q96MD7 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
C9orf85Q96MD7 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms