Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CCDC97Q96F63 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC97Q96F63 Z97205.2-201ENST00000564697 1639 ntBASIC15.65■□□□□ 0.1
CCDC97Q96F63 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC97Q96F63 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC97Q96F63 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
CCDC97Q96F63 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC97Q96F63 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.65■□□□□ 0.1
CCDC97Q96F63 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CCDC97Q96F63 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC97Q96F63 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC97Q96F63 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC97Q96F63 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC97Q96F63 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC97Q96F63 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC97Q96F63 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC97Q96F63 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC97Q96F63 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC15.65■□□□□ 0.1
CCDC97Q96F63 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CCDC97Q96F63 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC97Q96F63 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.65■□□□□ 0.1
CCDC97Q96F63 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CCDC97Q96F63 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.65■□□□□ 0.1
CCDC97Q96F63 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.65■□□□□ 0.1
CCDC97Q96F63 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC97Q96F63 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC97Q96F63 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.65■□□□□ 0.1
CCDC97Q96F63 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC97Q96F63 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC97Q96F63 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CCDC97Q96F63 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
CCDC97Q96F63 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
CCDC97Q96F63 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC97Q96F63 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.65■□□□□ 0.1
CCDC97Q96F63 MIR6069-201ENST00000620069 79 ntBASIC15.65■□□□□ 0.1
CCDC97Q96F63 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
CCDC97Q96F63 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.65■□□□□ 0.1
CCDC97Q96F63 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.65■□□□□ 0.1
CCDC97Q96F63 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC15.65■□□□□ 0.1
CCDC97Q96F63 AC013268.4-201ENST00000637413 2228 ntBASIC15.65■□□□□ 0.1
CCDC97Q96F63 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
CCDC97Q96F63 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
CCDC97Q96F63 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC97Q96F63 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC97Q96F63 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC97Q96F63 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
CCDC97Q96F63 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC97Q96F63 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC97Q96F63 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC97Q96F63 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC97Q96F63 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC97Q96F63 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC97Q96F63 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC97Q96F63 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.65■□□□□ 0.1
CCDC97Q96F63 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CCDC97Q96F63 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC97Q96F63 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.1
CCDC97Q96F63 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.1
CCDC97Q96F63 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CCDC97Q96F63 AC090616.6-203ENST00000579186 1945 ntBASIC15.64■□□□□ 0.09
CCDC97Q96F63 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC97Q96F63 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CCDC97Q96F63 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CCDC97Q96F63 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC97Q96F63 AC144831.1-201ENST00000573312 2656 ntBASIC15.64■□□□□ 0.09
CCDC97Q96F63 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC15.64■□□□□ 0.09
CCDC97Q96F63 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC97Q96F63 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC97Q96F63 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC97Q96F63 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC97Q96F63 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC97Q96F63 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC97Q96F63 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.64■□□□□ 0.09
CCDC97Q96F63 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC97Q96F63 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC97Q96F63 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.64■□□□□ 0.09
CCDC97Q96F63 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC97Q96F63 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC97Q96F63 AC073869.1-201ENST00000415574 2762 ntBASIC15.64■□□□□ 0.09
CCDC97Q96F63 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC97Q96F63 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC97Q96F63 SERBP1P3-201ENST00000459980 809 ntBASIC15.64■□□□□ 0.09
CCDC97Q96F63 RN7SL752P-201ENST00000463779 287 ntBASIC15.64■□□□□ 0.09
CCDC97Q96F63 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC97Q96F63 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC97Q96F63 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC97Q96F63 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC97Q96F63 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.64■□□□□ 0.09
CCDC97Q96F63 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.64■□□□□ 0.09
CCDC97Q96F63 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC97Q96F63 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC97Q96F63 AL162274.1-201ENST00000617191 1098 ntBASIC15.64■□□□□ 0.09
CCDC97Q96F63 AC004461.2-201ENST00000629517 803 ntBASIC15.64■□□□□ 0.09
CCDC97Q96F63 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC97Q96F63 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CCDC97Q96F63 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC97Q96F63 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC97Q96F63 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.64■□□□□ 0.09
CCDC97Q96F63 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CCDC97Q96F63 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms