Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PTP4A1Q93096 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
PTP4A1Q93096 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
PTP4A1Q93096 MYO15B-237ENST00000642007 4893 ntBASIC13.69□□□□□ -0.22
PTP4A1Q93096 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.69□□□□□ -0.22
PTP4A1Q93096 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
PTP4A1Q93096 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.69□□□□□ -0.22
PTP4A1Q93096 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.69□□□□□ -0.22
PTP4A1Q93096 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PTP4A1Q93096 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PTP4A1Q93096 AL360270.3-201ENST00000609118 1348 ntBASIC13.69□□□□□ -0.22
PTP4A1Q93096 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PTP4A1Q93096 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PTP4A1Q93096 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.69□□□□□ -0.22
PTP4A1Q93096 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PTP4A1Q93096 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.69□□□□□ -0.22
PTP4A1Q93096 AL928921.2-201ENST00000641325 2442 ntBASIC13.69□□□□□ -0.22
PTP4A1Q93096 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.69□□□□□ -0.22
PTP4A1Q93096 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
PTP4A1Q93096 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PTP4A1Q93096 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
PTP4A1Q93096 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PTP4A1Q93096 MIR943-201ENST00000401286 94 ntBASIC13.69□□□□□ -0.22
PTP4A1Q93096 PMS2P2-201ENST00000425039 1128 ntBASIC13.69□□□□□ -0.22
PTP4A1Q93096 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.69□□□□□ -0.22
PTP4A1Q93096 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.69□□□□□ -0.22
PTP4A1Q93096 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
PTP4A1Q93096 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PTP4A1Q93096 SAMD11P1-201ENST00000571429 661 ntBASIC13.69□□□□□ -0.22
PTP4A1Q93096 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PTP4A1Q93096 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.69□□□□□ -0.22
PTP4A1Q93096 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PTP4A1Q93096 AL138828.2-201ENST00000615812 383 ntBASIC13.69□□□□□ -0.22
PTP4A1Q93096 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.69□□□□□ -0.22
PTP4A1Q93096 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.69□□□□□ -0.22
PTP4A1Q93096 AL109936.8-201ENST00000641772 604 ntBASIC13.69□□□□□ -0.22
PTP4A1Q93096 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PTP4A1Q93096 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PTP4A1Q93096 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
PTP4A1Q93096 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PTP4A1Q93096 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
PTP4A1Q93096 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
PTP4A1Q93096 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PTP4A1Q93096 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PTP4A1Q93096 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
PTP4A1Q93096 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
PTP4A1Q93096 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
PTP4A1Q93096 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
PTP4A1Q93096 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
PTP4A1Q93096 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.69□□□□□ -0.22
PTP4A1Q93096 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.69□□□□□ -0.22
PTP4A1Q93096 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.68□□□□□ -0.22
PTP4A1Q93096 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
PTP4A1Q93096 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.68□□□□□ -0.22
PTP4A1Q93096 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.68□□□□□ -0.22
PTP4A1Q93096 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PTP4A1Q93096 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PTP4A1Q93096 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PTP4A1Q93096 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PTP4A1Q93096 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PTP4A1Q93096 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PTP4A1Q93096 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.68□□□□□ -0.22
PTP4A1Q93096 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PTP4A1Q93096 OR2I1P-210ENST00000642037 4691 ntBASIC13.68□□□□□ -0.22
PTP4A1Q93096 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.68□□□□□ -0.22
PTP4A1Q93096 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
PTP4A1Q93096 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
PTP4A1Q93096 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.68□□□□□ -0.22
PTP4A1Q93096 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PTP4A1Q93096 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
PTP4A1Q93096 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PTP4A1Q93096 AC015802.1-201ENST00000588104 1449 ntBASIC13.68□□□□□ -0.22
PTP4A1Q93096 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
PTP4A1Q93096 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC13.68□□□□□ -0.22
PTP4A1Q93096 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PTP4A1Q93096 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PTP4A1Q93096 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PTP4A1Q93096 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PTP4A1Q93096 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.68□□□□□ -0.22
PTP4A1Q93096 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC13.68□□□□□ -0.22
PTP4A1Q93096 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.68□□□□□ -0.22
PTP4A1Q93096 SDHAP3-202ENST00000515467 728 ntBASIC13.68□□□□□ -0.22
PTP4A1Q93096 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.68□□□□□ -0.22
PTP4A1Q93096 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.68□□□□□ -0.22
PTP4A1Q93096 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.68□□□□□ -0.22
PTP4A1Q93096 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.68□□□□□ -0.22
PTP4A1Q93096 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.68□□□□□ -0.22
PTP4A1Q93096 AC000095.1-201ENST00000603208 874 ntBASIC13.68□□□□□ -0.22
PTP4A1Q93096 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PTP4A1Q93096 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
PTP4A1Q93096 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PTP4A1Q93096 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PTP4A1Q93096 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PTP4A1Q93096 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PTP4A1Q93096 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
PTP4A1Q93096 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
PTP4A1Q93096 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.68□□□□□ -0.22
PTP4A1Q93096 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PTP4A1Q93096 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.68□□□□□ -0.22
PTP4A1Q93096 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms