Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SNED1Q8TER0 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18.09■□□□□ 0.49
SNED1Q8TER0 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SNED1Q8TER0 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNED1Q8TER0 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNED1Q8TER0 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.09■□□□□ 0.49
SNED1Q8TER0 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
SNED1Q8TER0 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNED1Q8TER0 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SNED1Q8TER0 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SNED1Q8TER0 ZBED1P1-201ENST00000502364 1930 ntBASIC18.09■□□□□ 0.49
SNED1Q8TER0 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC18.09■□□□□ 0.49
SNED1Q8TER0 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNED1Q8TER0 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SNED1Q8TER0 RNA5SP359-201ENST00000364838 113 ntBASIC18.09■□□□□ 0.49
SNED1Q8TER0 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNED1Q8TER0 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
SNED1Q8TER0 AL583805.1-201ENST00000391389 531 ntBASIC18.09■□□□□ 0.49
SNED1Q8TER0 AL357563.1-201ENST00000404728 395 ntBASIC18.09■□□□□ 0.49
SNED1Q8TER0 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC18.09■□□□□ 0.49
SNED1Q8TER0 LYPLA2P1-203ENST00000447689 696 ntBASIC18.09■□□□□ 0.49
SNED1Q8TER0 DUTP3-201ENST00000450025 415 ntBASIC18.09■□□□□ 0.49
SNED1Q8TER0 FTH1P22-201ENST00000456305 520 ntBASIC18.09■□□□□ 0.49
SNED1Q8TER0 AC026410.1-201ENST00000507366 1101 ntBASIC18.09■□□□□ 0.49
SNED1Q8TER0 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC18.09■□□□□ 0.49
SNED1Q8TER0 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC18.09■□□□□ 0.49
SNED1Q8TER0 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC18.09■□□□□ 0.49
SNED1Q8TER0 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC18.09■□□□□ 0.49
SNED1Q8TER0 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SNED1Q8TER0 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC18.09■□□□□ 0.49
SNED1Q8TER0 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNED1Q8TER0 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SNED1Q8TER0 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SNED1Q8TER0 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNED1Q8TER0 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SNED1Q8TER0 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
SNED1Q8TER0 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC18.09■□□□□ 0.49
SNED1Q8TER0 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNED1Q8TER0 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.09■□□□□ 0.49
SNED1Q8TER0 LILRP1-201ENST00000444199 1370 ntBASIC18.09■□□□□ 0.49
SNED1Q8TER0 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SNED1Q8TER0 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC18.09■□□□□ 0.49
SNED1Q8TER0 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SNED1Q8TER0 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SNED1Q8TER0 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SNED1Q8TER0 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SNED1Q8TER0 MBP-201ENST00000354542 575 ntTSL 2 BASIC18.08■□□□□ 0.49
SNED1Q8TER0 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC18.08■□□□□ 0.49
SNED1Q8TER0 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SNED1Q8TER0 CHCHD2P9-201ENST00000461726 456 ntBASIC18.08■□□□□ 0.49
SNED1Q8TER0 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC18.08■□□□□ 0.49
SNED1Q8TER0 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.49
SNED1Q8TER0 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC18.08■□□□□ 0.49
SNED1Q8TER0 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC18.08■□□□□ 0.49
SNED1Q8TER0 SIGLEC18P-201ENST00000602271 909 ntBASIC18.08■□□□□ 0.49
SNED1Q8TER0 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC18.08■□□□□ 0.49
SNED1Q8TER0 LINC01783-202ENST00000614408 828 ntBASIC18.08■□□□□ 0.49
SNED1Q8TER0 BX284668.2-205ENST00000619677 828 ntBASIC18.08■□□□□ 0.49
SNED1Q8TER0 AC027601.3-201ENST00000622907 509 ntBASIC18.08■□□□□ 0.49
SNED1Q8TER0 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC18.08■□□□□ 0.49
SNED1Q8TER0 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
SNED1Q8TER0 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SNED1Q8TER0 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC18.08■□□□□ 0.48
SNED1Q8TER0 TMBIM7P-202ENST00000641474 1516 ntBASIC18.08■□□□□ 0.48
SNED1Q8TER0 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC18.08■□□□□ 0.48
SNED1Q8TER0 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SNED1Q8TER0 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SNED1Q8TER0 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SNED1Q8TER0 BID-213ENST00000615414 2236 ntTSL 5 BASIC18.08■□□□□ 0.48
SNED1Q8TER0 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
SNED1Q8TER0 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SNED1Q8TER0 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.08■□□□□ 0.48
SNED1Q8TER0 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SNED1Q8TER0 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SNED1Q8TER0 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SNED1Q8TER0 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SNED1Q8TER0 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SNED1Q8TER0 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
SNED1Q8TER0 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC18.07■□□□□ 0.48
SNED1Q8TER0 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC18.07■□□□□ 0.48
SNED1Q8TER0 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNED1Q8TER0 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNED1Q8TER0 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNED1Q8TER0 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNED1Q8TER0 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SNED1Q8TER0 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNED1Q8TER0 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNED1Q8TER0 AC234644.1-201ENST00000406065 370 ntBASIC18.07■□□□□ 0.48
SNED1Q8TER0 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC18.07■□□□□ 0.48
SNED1Q8TER0 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SNED1Q8TER0 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SNED1Q8TER0 AL627422.1-201ENST00000434104 580 ntBASIC18.07■□□□□ 0.48
SNED1Q8TER0 AC012362.1-201ENST00000434906 739 ntBASIC18.07■□□□□ 0.48
SNED1Q8TER0 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC18.07■□□□□ 0.48
SNED1Q8TER0 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC18.07■□□□□ 0.48
SNED1Q8TER0 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC18.07■□□□□ 0.48
SNED1Q8TER0 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC18.07■□□□□ 0.48
SNED1Q8TER0 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC18.07■□□□□ 0.48
SNED1Q8TER0 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC18.07■□□□□ 0.48
SNED1Q8TER0 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 138.2 ms