Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHD5Q8TDI0 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHD5Q8TDI0 AL513477.1-201ENST00000602865 2407 ntBASIC15.16■□□□□ 0.02
CHD5Q8TDI0 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHD5Q8TDI0 AC023824.1-201ENST00000562945 2975 ntBASIC15.16■□□□□ 0.02
CHD5Q8TDI0 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.16■□□□□ 0.02
CHD5Q8TDI0 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHD5Q8TDI0 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHD5Q8TDI0 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CHD5Q8TDI0 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHD5Q8TDI0 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.16■□□□□ 0.02
CHD5Q8TDI0 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHD5Q8TDI0 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHD5Q8TDI0 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHD5Q8TDI0 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHD5Q8TDI0 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHD5Q8TDI0 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CHD5Q8TDI0 MIR1247-201ENST00000408206 136 ntBASIC15.16■□□□□ 0.02
CHD5Q8TDI0 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.16■□□□□ 0.02
CHD5Q8TDI0 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.16■□□□□ 0.02
CHD5Q8TDI0 APOA2-204ENST00000464492 530 ntTSL 3 BASIC15.16■□□□□ 0.02
CHD5Q8TDI0 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.16■□□□□ 0.02
CHD5Q8TDI0 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.16■□□□□ 0.02
CHD5Q8TDI0 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.16■□□□□ 0.02
CHD5Q8TDI0 EEF1DP1-201ENST00000585891 896 ntBASIC15.16■□□□□ 0.02
CHD5Q8TDI0 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CHD5Q8TDI0 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHD5Q8TDI0 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.16■□□□□ 0.02
CHD5Q8TDI0 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHD5Q8TDI0 AHCYP2-201ENST00000430630 1300 ntBASIC15.16■□□□□ 0.02
CHD5Q8TDI0 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CHD5Q8TDI0 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHD5Q8TDI0 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHD5Q8TDI0 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CHD5Q8TDI0 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
CHD5Q8TDI0 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CHD5Q8TDI0 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHD5Q8TDI0 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHD5Q8TDI0 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHD5Q8TDI0 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHD5Q8TDI0 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CHD5Q8TDI0 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.15■□□□□ 0.02
CHD5Q8TDI0 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CHD5Q8TDI0 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CHD5Q8TDI0 GOLGA2P4-201ENST00000441462 777 ntBASIC15.15■□□□□ 0.02
CHD5Q8TDI0 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CHD5Q8TDI0 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.15■□□□□ 0.02
CHD5Q8TDI0 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.15■□□□□ 0.02
CHD5Q8TDI0 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC15.15■□□□□ 0.02
CHD5Q8TDI0 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CHD5Q8TDI0 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHD5Q8TDI0 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CHD5Q8TDI0 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHD5Q8TDI0 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC15.15■□□□□ 0.02
CHD5Q8TDI0 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHD5Q8TDI0 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CHD5Q8TDI0 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.15■□□□□ 0.02
CHD5Q8TDI0 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHD5Q8TDI0 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.15■□□□□ 0.02
CHD5Q8TDI0 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHD5Q8TDI0 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHD5Q8TDI0 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CHD5Q8TDI0 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHD5Q8TDI0 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHD5Q8TDI0 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHD5Q8TDI0 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC15.15■□□□□ 0.02
CHD5Q8TDI0 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.15■□□□□ 0.02
CHD5Q8TDI0 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CHD5Q8TDI0 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CHD5Q8TDI0 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHD5Q8TDI0 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC15.15■□□□□ 0.02
CHD5Q8TDI0 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CHD5Q8TDI0 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.15■□□□□ 0.02
CHD5Q8TDI0 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC15.15■□□□□ 0.02
CHD5Q8TDI0 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHD5Q8TDI0 RPSAP36-202ENST00000494591 1261 ntBASIC15.15■□□□□ 0.02
CHD5Q8TDI0 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.15■□□□□ 0.02
CHD5Q8TDI0 KRT8P4-201ENST00000509735 1454 ntBASIC15.15■□□□□ 0.02
CHD5Q8TDI0 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CHD5Q8TDI0 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.15■□□□□ 0.02
CHD5Q8TDI0 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.15■□□□□ 0.02
CHD5Q8TDI0 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.15■□□□□ 0.02
CHD5Q8TDI0 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.15■□□□□ 0.02
CHD5Q8TDI0 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.15■□□□□ 0.02
CHD5Q8TDI0 AL096828.3-201ENST00000615354 462 ntBASIC15.15■□□□□ 0.02
CHD5Q8TDI0 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.15■□□□□ 0.02
CHD5Q8TDI0 ABBA01031663.1-201ENST00000635630 790 ntBASIC15.15■□□□□ 0.02
CHD5Q8TDI0 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHD5Q8TDI0 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.14■□□□□ 0.01
CHD5Q8TDI0 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CHD5Q8TDI0 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHD5Q8TDI0 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CHD5Q8TDI0 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHD5Q8TDI0 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.14■□□□□ 0.01
CHD5Q8TDI0 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHD5Q8TDI0 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHD5Q8TDI0 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHD5Q8TDI0 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.14■□□□□ 0.01
CHD5Q8TDI0 OR6D1P-202ENST00000641007 5290 ntBASIC15.14■□□□□ 0.01
CHD5Q8TDI0 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms