Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDH19Q8TAB3 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PCDH19Q8TAB3 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
PCDH19Q8TAB3 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PCDH19Q8TAB3 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDH19Q8TAB3 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PCDH19Q8TAB3 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PCDH19Q8TAB3 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PCDH19Q8TAB3 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
PCDH19Q8TAB3 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.68■□□□□ 0.1
PCDH19Q8TAB3 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.68■□□□□ 0.1
PCDH19Q8TAB3 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
PCDH19Q8TAB3 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDH19Q8TAB3 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDH19Q8TAB3 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDH19Q8TAB3 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDH19Q8TAB3 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDH19Q8TAB3 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDH19Q8TAB3 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDH19Q8TAB3 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.67■□□□□ 0.1
PCDH19Q8TAB3 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.67■□□□□ 0.1
PCDH19Q8TAB3 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
PCDH19Q8TAB3 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDH19Q8TAB3 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PCDH19Q8TAB3 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PCDH19Q8TAB3 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.67■□□□□ 0.1
PCDH19Q8TAB3 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
PCDH19Q8TAB3 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.67■□□□□ 0.1
PCDH19Q8TAB3 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDH19Q8TAB3 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PCDH19Q8TAB3 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDH19Q8TAB3 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.67■□□□□ 0.1
PCDH19Q8TAB3 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDH19Q8TAB3 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PCDH19Q8TAB3 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.67■□□□□ 0.1
PCDH19Q8TAB3 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDH19Q8TAB3 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.67■□□□□ 0.1
PCDH19Q8TAB3 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PCDH19Q8TAB3 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
PCDH19Q8TAB3 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PCDH19Q8TAB3 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
PCDH19Q8TAB3 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PCDH19Q8TAB3 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.67■□□□□ 0.1
PCDH19Q8TAB3 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.67■□□□□ 0.1
PCDH19Q8TAB3 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.67■□□□□ 0.1
PCDH19Q8TAB3 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PCDH19Q8TAB3 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDH19Q8TAB3 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDH19Q8TAB3 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.67■□□□□ 0.1
PCDH19Q8TAB3 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.67■□□□□ 0.1
PCDH19Q8TAB3 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
PCDH19Q8TAB3 AC005912.2-201ENST00000619492 2400 ntBASIC15.67■□□□□ 0.1
PCDH19Q8TAB3 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDH19Q8TAB3 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDH19Q8TAB3 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PCDH19Q8TAB3 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.67■□□□□ 0.1
PCDH19Q8TAB3 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PCDH19Q8TAB3 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.67■□□□□ 0.1
PCDH19Q8TAB3 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.67■□□□□ 0.1
PCDH19Q8TAB3 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.67■□□□□ 0.1
PCDH19Q8TAB3 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PCDH19Q8TAB3 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
PCDH19Q8TAB3 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH19Q8TAB3 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH19Q8TAB3 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH19Q8TAB3 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.66■□□□□ 0.1
PCDH19Q8TAB3 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH19Q8TAB3 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH19Q8TAB3 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH19Q8TAB3 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH19Q8TAB3 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH19Q8TAB3 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH19Q8TAB3 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH19Q8TAB3 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH19Q8TAB3 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH19Q8TAB3 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
PCDH19Q8TAB3 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH19Q8TAB3 OR8S1-201ENST00000310194 1080 ntBASIC15.66■□□□□ 0.1
PCDH19Q8TAB3 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH19Q8TAB3 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
PCDH19Q8TAB3 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH19Q8TAB3 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH19Q8TAB3 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH19Q8TAB3 KLF2P2-201ENST00000416807 1039 ntBASIC15.66■□□□□ 0.1
PCDH19Q8TAB3 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.66■□□□□ 0.1
PCDH19Q8TAB3 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.66■□□□□ 0.1
PCDH19Q8TAB3 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.66■□□□□ 0.1
PCDH19Q8TAB3 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.66■□□□□ 0.1
PCDH19Q8TAB3 INE1-201ENST00000456273 945 ntBASIC15.66■□□□□ 0.1
PCDH19Q8TAB3 RN7SL752P-201ENST00000463779 287 ntBASIC15.66■□□□□ 0.1
PCDH19Q8TAB3 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.66■□□□□ 0.1
PCDH19Q8TAB3 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.66■□□□□ 0.1
PCDH19Q8TAB3 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.66■□□□□ 0.1
PCDH19Q8TAB3 CLUHP6-201ENST00000580789 941 ntBASIC15.66■□□□□ 0.1
PCDH19Q8TAB3 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PCDH19Q8TAB3 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.66■□□□□ 0.1
PCDH19Q8TAB3 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.66■□□□□ 0.1
PCDH19Q8TAB3 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
PCDH19Q8TAB3 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.66■□□□□ 0.1
PCDH19Q8TAB3 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms