Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
SRFBP1Q8NEF9 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.54□□□□□ -0.08
SRFBP1Q8NEF9 CU634019.7-201ENST00000624153 1185 ntBASIC14.54□□□□□ -0.08
SRFBP1Q8NEF9 FP236241.2-201ENST00000624906 1185 ntBASIC14.54□□□□□ -0.08
SRFBP1Q8NEF9 AL033527.5-201ENST00000641382 801 ntBASIC14.54□□□□□ -0.08
SRFBP1Q8NEF9 AL358472.5-202ENST00000641448 1267 ntBASIC14.54□□□□□ -0.08
SRFBP1Q8NEF9 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SRFBP1Q8NEF9 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SRFBP1Q8NEF9 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SRFBP1Q8NEF9 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SRFBP1Q8NEF9 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SRFBP1Q8NEF9 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
SRFBP1Q8NEF9 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.54□□□□□ -0.08
SRFBP1Q8NEF9 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
SRFBP1Q8NEF9 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SRFBP1Q8NEF9 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SRFBP1Q8NEF9 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SRFBP1Q8NEF9 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SRFBP1Q8NEF9 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SRFBP1Q8NEF9 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.54□□□□□ -0.08
SRFBP1Q8NEF9 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SRFBP1Q8NEF9 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SRFBP1Q8NEF9 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SRFBP1Q8NEF9 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.54□□□□□ -0.08
SRFBP1Q8NEF9 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SRFBP1Q8NEF9 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SRFBP1Q8NEF9 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SRFBP1Q8NEF9 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SRFBP1Q8NEF9 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.53□□□□□ -0.08
SRFBP1Q8NEF9 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.53□□□□□ -0.08
SRFBP1Q8NEF9 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SRFBP1Q8NEF9 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SRFBP1Q8NEF9 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SRFBP1Q8NEF9 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SRFBP1Q8NEF9 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.53□□□□□ -0.08
SRFBP1Q8NEF9 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
SRFBP1Q8NEF9 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SRFBP1Q8NEF9 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
SRFBP1Q8NEF9 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SRFBP1Q8NEF9 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SRFBP1Q8NEF9 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
SRFBP1Q8NEF9 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SRFBP1Q8NEF9 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SRFBP1Q8NEF9 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SRFBP1Q8NEF9 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
SRFBP1Q8NEF9 LILRP1-201ENST00000444199 1370 ntBASIC14.53□□□□□ -0.08
SRFBP1Q8NEF9 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SRFBP1Q8NEF9 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SRFBP1Q8NEF9 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
SRFBP1Q8NEF9 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SRFBP1Q8NEF9 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
SRFBP1Q8NEF9 AL139094.1-201ENST00000405549 1188 ntBASIC14.53□□□□□ -0.08
SRFBP1Q8NEF9 AP006294.1-201ENST00000415407 339 ntBASIC14.53□□□□□ -0.08
SRFBP1Q8NEF9 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SRFBP1Q8NEF9 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.53□□□□□ -0.08
SRFBP1Q8NEF9 AC011495.1-201ENST00000498085 584 ntBASIC14.53□□□□□ -0.08
SRFBP1Q8NEF9 KRT18P25-201ENST00000508931 1278 ntBASIC14.53□□□□□ -0.08
SRFBP1Q8NEF9 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SRFBP1Q8NEF9 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
SRFBP1Q8NEF9 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.53□□□□□ -0.08
SRFBP1Q8NEF9 MIR3197-201ENST00000582241 73 ntBASIC14.53□□□□□ -0.08
SRFBP1Q8NEF9 CTBP2P3-201ENST00000585629 1255 ntBASIC14.53□□□□□ -0.08
SRFBP1Q8NEF9 WFDC1-204ENST00000613603 549 ntBASIC14.53□□□□□ -0.08
SRFBP1Q8NEF9 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SRFBP1Q8NEF9 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
SRFBP1Q8NEF9 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SRFBP1Q8NEF9 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SRFBP1Q8NEF9 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SRFBP1Q8NEF9 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.53□□□□□ -0.08
SRFBP1Q8NEF9 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SRFBP1Q8NEF9 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SRFBP1Q8NEF9 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.52□□□□□ -0.08
SRFBP1Q8NEF9 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.08
SRFBP1Q8NEF9 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SRFBP1Q8NEF9 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.52□□□□□ -0.08
SRFBP1Q8NEF9 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
SRFBP1Q8NEF9 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
SRFBP1Q8NEF9 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.52□□□□□ -0.08
SRFBP1Q8NEF9 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
SRFBP1Q8NEF9 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.52□□□□□ -0.08
SRFBP1Q8NEF9 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
SRFBP1Q8NEF9 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SRFBP1Q8NEF9 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SRFBP1Q8NEF9 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SRFBP1Q8NEF9 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.52□□□□□ -0.08
SRFBP1Q8NEF9 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
SRFBP1Q8NEF9 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SRFBP1Q8NEF9 KRT8P14-201ENST00000414254 1442 ntBASIC14.52□□□□□ -0.08
SRFBP1Q8NEF9 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
SRFBP1Q8NEF9 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
SRFBP1Q8NEF9 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SRFBP1Q8NEF9 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
SRFBP1Q8NEF9 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SRFBP1Q8NEF9 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SRFBP1Q8NEF9 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.52□□□□□ -0.08
SRFBP1Q8NEF9 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SRFBP1Q8NEF9 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SRFBP1Q8NEF9 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
SRFBP1Q8NEF9 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.52□□□□□ -0.09
SRFBP1Q8NEF9 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 130.6 ms