Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
RAB42Q8N4Z0 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.8□□□□□ -0.04
RAB42Q8N4Z0 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
RAB42Q8N4Z0 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB42Q8N4Z0 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB42Q8N4Z0 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB42Q8N4Z0 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RAB42Q8N4Z0 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB42Q8N4Z0 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.8□□□□□ -0.04
RAB42Q8N4Z0 RNU1-114P-201ENST00000365297 166 ntBASIC14.8□□□□□ -0.04
RAB42Q8N4Z0 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
RAB42Q8N4Z0 ACTBP8-201ENST00000403258 1108 ntBASIC14.8□□□□□ -0.04
RAB42Q8N4Z0 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.8□□□□□ -0.04
RAB42Q8N4Z0 KRT43P-201ENST00000434019 910 ntBASIC14.8□□□□□ -0.04
RAB42Q8N4Z0 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.8□□□□□ -0.04
RAB42Q8N4Z0 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB42Q8N4Z0 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB42Q8N4Z0 AC012441.1-201ENST00000446669 685 ntBASIC14.8□□□□□ -0.04
RAB42Q8N4Z0 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.8□□□□□ -0.04
RAB42Q8N4Z0 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAB42Q8N4Z0 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAB42Q8N4Z0 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.8□□□□□ -0.04
RAB42Q8N4Z0 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.8□□□□□ -0.04
RAB42Q8N4Z0 MIR5189-201ENST00000577370 114 ntBASIC14.8□□□□□ -0.04
RAB42Q8N4Z0 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.8□□□□□ -0.04
RAB42Q8N4Z0 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.8□□□□□ -0.04
RAB42Q8N4Z0 AL022328.1-201ENST00000610050 478 ntBASIC14.8□□□□□ -0.04
RAB42Q8N4Z0 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.8□□□□□ -0.04
RAB42Q8N4Z0 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAB42Q8N4Z0 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.8□□□□□ -0.04
RAB42Q8N4Z0 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB42Q8N4Z0 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB42Q8N4Z0 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.8□□□□□ -0.04
RAB42Q8N4Z0 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB42Q8N4Z0 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB42Q8N4Z0 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.8□□□□□ -0.04
RAB42Q8N4Z0 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAB42Q8N4Z0 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB42Q8N4Z0 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
RAB42Q8N4Z0 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.8□□□□□ -0.04
RAB42Q8N4Z0 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
RAB42Q8N4Z0 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAB42Q8N4Z0 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
RAB42Q8N4Z0 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.8□□□□□ -0.04
RAB42Q8N4Z0 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB42Q8N4Z0 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB42Q8N4Z0 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
RAB42Q8N4Z0 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB42Q8N4Z0 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB42Q8N4Z0 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB42Q8N4Z0 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14.79□□□□□ -0.04
RAB42Q8N4Z0 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAB42Q8N4Z0 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.79□□□□□ -0.04
RAB42Q8N4Z0 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB42Q8N4Z0 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
RAB42Q8N4Z0 TP73-201ENST00000346387 4854 ntTSL 5 BASIC14.79□□□□□ -0.04
RAB42Q8N4Z0 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.79□□□□□ -0.04
RAB42Q8N4Z0 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB42Q8N4Z0 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB42Q8N4Z0 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAB42Q8N4Z0 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB42Q8N4Z0 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAB42Q8N4Z0 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAB42Q8N4Z0 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.79□□□□□ -0.04
RAB42Q8N4Z0 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.79□□□□□ -0.04
RAB42Q8N4Z0 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
RAB42Q8N4Z0 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB42Q8N4Z0 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
RAB42Q8N4Z0 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.79□□□□□ -0.04
RAB42Q8N4Z0 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.79□□□□□ -0.04
RAB42Q8N4Z0 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.79□□□□□ -0.04
RAB42Q8N4Z0 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.79□□□□□ -0.04
RAB42Q8N4Z0 GIMAP3P-201ENST00000495150 836 ntBASIC14.79□□□□□ -0.04
RAB42Q8N4Z0 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAB42Q8N4Z0 ZBED1P1-201ENST00000502364 1930 ntBASIC14.79□□□□□ -0.04
RAB42Q8N4Z0 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.79□□□□□ -0.04
RAB42Q8N4Z0 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.79□□□□□ -0.04
RAB42Q8N4Z0 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.79□□□□□ -0.04
RAB42Q8N4Z0 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.79□□□□□ -0.04
RAB42Q8N4Z0 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
RAB42Q8N4Z0 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.79□□□□□ -0.04
RAB42Q8N4Z0 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB42Q8N4Z0 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.79□□□□□ -0.04
RAB42Q8N4Z0 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB42Q8N4Z0 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAB42Q8N4Z0 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.78□□□□□ -0.04
RAB42Q8N4Z0 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.78□□□□□ -0.04
RAB42Q8N4Z0 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.78□□□□□ -0.04
RAB42Q8N4Z0 MST1L-201ENST00000442552 2185 ntBASIC14.78□□□□□ -0.04
RAB42Q8N4Z0 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB42Q8N4Z0 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
RAB42Q8N4Z0 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.78□□□□□ -0.04
RAB42Q8N4Z0 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB42Q8N4Z0 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB42Q8N4Z0 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB42Q8N4Z0 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
RAB42Q8N4Z0 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
RAB42Q8N4Z0 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
RAB42Q8N4Z0 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB42Q8N4Z0 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms