Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC13.87□□□□□ -0.19
COL27A1Q8IZC6 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC13.87□□□□□ -0.19
COL27A1Q8IZC6 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.87□□□□□ -0.19
COL27A1Q8IZC6 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
COL27A1Q8IZC6 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
COL27A1Q8IZC6 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.87□□□□□ -0.19
COL27A1Q8IZC6 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
COL27A1Q8IZC6 CR383656.3-201ENST00000551315 183 ntBASIC13.87□□□□□ -0.19
COL27A1Q8IZC6 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
COL27A1Q8IZC6 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC13.87□□□□□ -0.19
COL27A1Q8IZC6 RN7SL665P-201ENST00000578793 300 ntBASIC13.87□□□□□ -0.19
COL27A1Q8IZC6 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC13.87□□□□□ -0.19
COL27A1Q8IZC6 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
COL27A1Q8IZC6 AC005357.2-202ENST00000590507 1060 ntBASIC13.87□□□□□ -0.19
COL27A1Q8IZC6 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC13.87□□□□□ -0.19
COL27A1Q8IZC6 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
COL27A1Q8IZC6 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
COL27A1Q8IZC6 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
COL27A1Q8IZC6 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
COL27A1Q8IZC6 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
COL27A1Q8IZC6 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC13.87□□□□□ -0.19
COL27A1Q8IZC6 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
COL27A1Q8IZC6 AC092135.3-201ENST00000624151 1846 ntBASIC13.87□□□□□ -0.19
COL27A1Q8IZC6 AP002353.1-201ENST00000528257 1599 ntBASIC13.87□□□□□ -0.19
COL27A1Q8IZC6 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
COL27A1Q8IZC6 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
COL27A1Q8IZC6 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
COL27A1Q8IZC6 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
COL27A1Q8IZC6 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC13.87□□□□□ -0.19
COL27A1Q8IZC6 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC13.87□□□□□ -0.19
COL27A1Q8IZC6 RN7SL277P-201ENST00000481521 288 ntBASIC13.87□□□□□ -0.19
COL27A1Q8IZC6 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC13.87□□□□□ -0.19
COL27A1Q8IZC6 MIR2392-201ENST00000584881 84 ntBASIC13.87□□□□□ -0.19
COL27A1Q8IZC6 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
COL27A1Q8IZC6 PPT1-215ENST00000641471 2368 ntBASIC13.86□□□□□ -0.19
COL27A1Q8IZC6 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC13.86□□□□□ -0.19
COL27A1Q8IZC6 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
COL27A1Q8IZC6 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
COL27A1Q8IZC6 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
COL27A1Q8IZC6 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC13.86□□□□□ -0.19
COL27A1Q8IZC6 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
COL27A1Q8IZC6 CICP23-201ENST00000605013 2741 ntBASIC13.86□□□□□ -0.19
COL27A1Q8IZC6 DOC2GP-204ENST00000639052 2548 ntBASIC13.86□□□□□ -0.19
COL27A1Q8IZC6 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
COL27A1Q8IZC6 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
COL27A1Q8IZC6 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
COL27A1Q8IZC6 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC13.86□□□□□ -0.19
COL27A1Q8IZC6 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
COL27A1Q8IZC6 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
COL27A1Q8IZC6 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
COL27A1Q8IZC6 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC13.86□□□□□ -0.19
COL27A1Q8IZC6 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.86□□□□□ -0.19
COL27A1Q8IZC6 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
COL27A1Q8IZC6 MRPL37P1-201ENST00000592451 1337 ntBASIC13.86□□□□□ -0.19
COL27A1Q8IZC6 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC13.86□□□□□ -0.19
COL27A1Q8IZC6 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
COL27A1Q8IZC6 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
COL27A1Q8IZC6 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
COL27A1Q8IZC6 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC13.86□□□□□ -0.19
COL27A1Q8IZC6 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
COL27A1Q8IZC6 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
COL27A1Q8IZC6 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC13.86□□□□□ -0.19
COL27A1Q8IZC6 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC13.86□□□□□ -0.19
COL27A1Q8IZC6 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC13.86□□□□□ -0.19
COL27A1Q8IZC6 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC13.86□□□□□ -0.19
COL27A1Q8IZC6 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC13.86□□□□□ -0.19
COL27A1Q8IZC6 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC13.86□□□□□ -0.19
COL27A1Q8IZC6 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
COL27A1Q8IZC6 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC13.86□□□□□ -0.19
COL27A1Q8IZC6 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
COL27A1Q8IZC6 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.86□□□□□ -0.19
COL27A1Q8IZC6 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
COL27A1Q8IZC6 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
COL27A1Q8IZC6 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL27A1Q8IZC6 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.85□□□□□ -0.19
COL27A1Q8IZC6 AC009093.10-201ENST00000641956 1442 ntBASIC13.85□□□□□ -0.19
COL27A1Q8IZC6 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL27A1Q8IZC6 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL27A1Q8IZC6 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL27A1Q8IZC6 CES3-203ENST00000543856 3178 ntTSL 2 BASIC13.85□□□□□ -0.19
COL27A1Q8IZC6 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
COL27A1Q8IZC6 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL27A1Q8IZC6 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.85□□□□□ -0.19
COL27A1Q8IZC6 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL27A1Q8IZC6 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
COL27A1Q8IZC6 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL27A1Q8IZC6 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC13.85□□□□□ -0.19
COL27A1Q8IZC6 AC004837.1-201ENST00000446267 564 ntBASIC13.85□□□□□ -0.19
COL27A1Q8IZC6 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC13.85□□□□□ -0.19
COL27A1Q8IZC6 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC13.85□□□□□ -0.19
COL27A1Q8IZC6 LINC00634-202ENST00000505157 222 ntBASIC13.85□□□□□ -0.19
COL27A1Q8IZC6 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC13.85□□□□□ -0.19
COL27A1Q8IZC6 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL27A1Q8IZC6 KRT8P1-201ENST00000557533 1207 ntBASIC13.85□□□□□ -0.19
COL27A1Q8IZC6 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC13.85□□□□□ -0.19
COL27A1Q8IZC6 AC124068.2-201ENST00000569473 1109 ntBASIC13.85□□□□□ -0.19
COL27A1Q8IZC6 NUDT4P2-201ENST00000578341 546 ntBASIC13.85□□□□□ -0.19
COL27A1Q8IZC6 MIR3180-2-201ENST00000581748 88 ntBASIC13.85□□□□□ -0.19
COL27A1Q8IZC6 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC13.85□□□□□ -0.19
COL27A1Q8IZC6 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms