Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC17.98■□□□□ 0.47
SLX4Q8IY92 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC17.98■□□□□ 0.47
SLX4Q8IY92 MIR2392-201ENST00000584881 84 ntBASIC17.98■□□□□ 0.47
SLX4Q8IY92 HKR1-225ENST00000592168 566 ntTSL 4 BASIC17.98■□□□□ 0.47
SLX4Q8IY92 AC073592.2-201ENST00000623062 780 ntBASIC17.98■□□□□ 0.47
SLX4Q8IY92 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLX4Q8IY92 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLX4Q8IY92 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC17.98■□□□□ 0.47
SLX4Q8IY92 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SLX4Q8IY92 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
SLX4Q8IY92 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLX4Q8IY92 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.98■□□□□ 0.47
SLX4Q8IY92 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLX4Q8IY92 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SLX4Q8IY92 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SLX4Q8IY92 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLX4Q8IY92 SERF2-206ENST00000409291 807 ntTSL 3 BASIC17.98■□□□□ 0.47
SLX4Q8IY92 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SLX4Q8IY92 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC17.98■□□□□ 0.47
SLX4Q8IY92 AC084752.1-201ENST00000509766 622 ntBASIC17.98■□□□□ 0.47
SLX4Q8IY92 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLX4Q8IY92 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC17.98■□□□□ 0.47
SLX4Q8IY92 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLX4Q8IY92 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC17.97■□□□□ 0.47
SLX4Q8IY92 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLX4Q8IY92 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLX4Q8IY92 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLX4Q8IY92 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLX4Q8IY92 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLX4Q8IY92 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLX4Q8IY92 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLX4Q8IY92 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
SLX4Q8IY92 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLX4Q8IY92 AL118508.1-201ENST00000613502 2345 ntBASIC17.97■□□□□ 0.47
SLX4Q8IY92 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC17.97■□□□□ 0.47
SLX4Q8IY92 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLX4Q8IY92 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLX4Q8IY92 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC17.97■□□□□ 0.47
SLX4Q8IY92 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLX4Q8IY92 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC17.97■□□□□ 0.47
SLX4Q8IY92 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC17.97■□□□□ 0.47
SLX4Q8IY92 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
SLX4Q8IY92 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLX4Q8IY92 KRT17P5-201ENST00000332088 839 ntBASIC17.97■□□□□ 0.47
SLX4Q8IY92 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
SLX4Q8IY92 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
SLX4Q8IY92 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLX4Q8IY92 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC17.97■□□□□ 0.47
SLX4Q8IY92 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLX4Q8IY92 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC17.97■□□□□ 0.47
SLX4Q8IY92 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC17.97■□□□□ 0.47
SLX4Q8IY92 RN7SL596P-201ENST00000582123 288 ntBASIC17.97■□□□□ 0.47
SLX4Q8IY92 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC17.97■□□□□ 0.47
SLX4Q8IY92 NAMA-206ENST00000605377 509 ntTSL 5 BASIC17.97■□□□□ 0.47
SLX4Q8IY92 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SLX4Q8IY92 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLX4Q8IY92 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLX4Q8IY92 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLX4Q8IY92 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLX4Q8IY92 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
SLX4Q8IY92 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLX4Q8IY92 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLX4Q8IY92 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLX4Q8IY92 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLX4Q8IY92 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLX4Q8IY92 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLX4Q8IY92 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLX4Q8IY92 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
SLX4Q8IY92 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLX4Q8IY92 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.96■□□□□ 0.47
SLX4Q8IY92 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLX4Q8IY92 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLX4Q8IY92 JTB-202ENST00000356648 1040 ntTSL 2 BASIC17.96■□□□□ 0.47
SLX4Q8IY92 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLX4Q8IY92 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLX4Q8IY92 RN7SKP109-201ENST00000410592 316 ntBASIC17.96■□□□□ 0.47
SLX4Q8IY92 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLX4Q8IY92 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC17.96■□□□□ 0.47
SLX4Q8IY92 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
SLX4Q8IY92 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC17.96■□□□□ 0.47
SLX4Q8IY92 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
SLX4Q8IY92 AC002044.2-201ENST00000624910 970 ntBASIC17.96■□□□□ 0.47
SLX4Q8IY92 MVK-217ENST00000639206 367 ntTSL 5 BASIC17.96■□□□□ 0.47
SLX4Q8IY92 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLX4Q8IY92 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.96■□□□□ 0.47
SLX4Q8IY92 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLX4Q8IY92 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLX4Q8IY92 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC17.96■□□□□ 0.47
SLX4Q8IY92 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLX4Q8IY92 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLX4Q8IY92 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
SLX4Q8IY92 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.96■□□□□ 0.47
SLX4Q8IY92 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC17.96■□□□□ 0.47
SLX4Q8IY92 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.96■□□□□ 0.47
SLX4Q8IY92 PRAL-201ENST00000624952 3286 ntBASIC17.96■□□□□ 0.47
SLX4Q8IY92 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.96■□□□□ 0.47
SLX4Q8IY92 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLX4Q8IY92 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC17.96■□□□□ 0.47
SLX4Q8IY92 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLX4Q8IY92 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms