Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC83Q8IWF9 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CCDC83Q8IWF9 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC83Q8IWF9 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
CCDC83Q8IWF9 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC83Q8IWF9 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CCDC83Q8IWF9 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC83Q8IWF9 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC83Q8IWF9 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC83Q8IWF9 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC83Q8IWF9 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC83Q8IWF9 AL158070.2-201ENST00000623713 1621 ntBASIC17.87■□□□□ 0.45
CCDC83Q8IWF9 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC83Q8IWF9 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC83Q8IWF9 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC83Q8IWF9 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC83Q8IWF9 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC83Q8IWF9 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC83Q8IWF9 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC83Q8IWF9 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC83Q8IWF9 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC83Q8IWF9 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC83Q8IWF9 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC83Q8IWF9 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC83Q8IWF9 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.87■□□□□ 0.45
CCDC83Q8IWF9 VDAC1P7-201ENST00000462417 847 ntBASIC17.87■□□□□ 0.45
CCDC83Q8IWF9 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.87■□□□□ 0.45
CCDC83Q8IWF9 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC83Q8IWF9 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.87■□□□□ 0.45
CCDC83Q8IWF9 RARRES2P5-201ENST00000564013 466 ntBASIC17.87■□□□□ 0.45
CCDC83Q8IWF9 AC036164.1-201ENST00000570544 333 ntBASIC17.87■□□□□ 0.45
CCDC83Q8IWF9 AL049840.4-201ENST00000602422 811 ntBASIC17.87■□□□□ 0.45
CCDC83Q8IWF9 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.87■□□□□ 0.45
CCDC83Q8IWF9 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.87■□□□□ 0.45
CCDC83Q8IWF9 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.87■□□□□ 0.45
CCDC83Q8IWF9 AL662799.1-202ENST00000614205 422 ntBASIC17.87■□□□□ 0.45
CCDC83Q8IWF9 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.87■□□□□ 0.45
CCDC83Q8IWF9 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
CCDC83Q8IWF9 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.87■□□□□ 0.45
CCDC83Q8IWF9 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC83Q8IWF9 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC83Q8IWF9 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC83Q8IWF9 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.87■□□□□ 0.45
CCDC83Q8IWF9 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CCDC83Q8IWF9 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC83Q8IWF9 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
CCDC83Q8IWF9 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC83Q8IWF9 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC83Q8IWF9 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC83Q8IWF9 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CCDC83Q8IWF9 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC83Q8IWF9 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC83Q8IWF9 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CCDC83Q8IWF9 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC17.87■□□□□ 0.45
CCDC83Q8IWF9 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CCDC83Q8IWF9 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC83Q8IWF9 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CCDC83Q8IWF9 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC83Q8IWF9 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CCDC83Q8IWF9 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
CCDC83Q8IWF9 ABR-228ENST00000574437 3196 ntTSL 5 BASIC17.86■□□□□ 0.45
CCDC83Q8IWF9 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC83Q8IWF9 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC83Q8IWF9 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC83Q8IWF9 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC83Q8IWF9 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC83Q8IWF9 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC83Q8IWF9 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC83Q8IWF9 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC83Q8IWF9 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC83Q8IWF9 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC83Q8IWF9 AL353779.1-201ENST00000434793 351 ntBASIC17.86■□□□□ 0.45
CCDC83Q8IWF9 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC83Q8IWF9 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.86■□□□□ 0.45
CCDC83Q8IWF9 AC026410.3-201ENST00000514280 936 ntBASIC17.86■□□□□ 0.45
CCDC83Q8IWF9 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC83Q8IWF9 TPRX2P-201ENST00000535362 881 ntBASIC17.86■□□□□ 0.45
CCDC83Q8IWF9 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC83Q8IWF9 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
CCDC83Q8IWF9 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC83Q8IWF9 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC17.86■□□□□ 0.45
CCDC83Q8IWF9 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CCDC83Q8IWF9 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC83Q8IWF9 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.86■□□□□ 0.45
CCDC83Q8IWF9 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC83Q8IWF9 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC83Q8IWF9 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC83Q8IWF9 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC83Q8IWF9 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC83Q8IWF9 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC83Q8IWF9 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC17.86■□□□□ 0.45
CCDC83Q8IWF9 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC83Q8IWF9 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC83Q8IWF9 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC83Q8IWF9 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
CCDC83Q8IWF9 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC83Q8IWF9 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
CCDC83Q8IWF9 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC17.85■□□□□ 0.45
CCDC83Q8IWF9 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC83Q8IWF9 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms