Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.08□□□□□ -0.16
VRK2Q86Y07 GNAQP1-201ENST00000444815 1067 ntBASIC14.08□□□□□ -0.16
VRK2Q86Y07 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.08□□□□□ -0.16
VRK2Q86Y07 VDAC1P7-201ENST00000462417 847 ntBASIC14.08□□□□□ -0.16
VRK2Q86Y07 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
VRK2Q86Y07 RN7SL399P-201ENST00000471648 279 ntBASIC14.08□□□□□ -0.16
VRK2Q86Y07 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.08□□□□□ -0.16
VRK2Q86Y07 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.08□□□□□ -0.16
VRK2Q86Y07 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.08□□□□□ -0.16
VRK2Q86Y07 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.08□□□□□ -0.16
VRK2Q86Y07 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
VRK2Q86Y07 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.08□□□□□ -0.16
VRK2Q86Y07 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
VRK2Q86Y07 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.08□□□□□ -0.16
VRK2Q86Y07 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.08□□□□□ -0.16
VRK2Q86Y07 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
VRK2Q86Y07 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
VRK2Q86Y07 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VRK2Q86Y07 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VRK2Q86Y07 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VRK2Q86Y07 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.08□□□□□ -0.16
VRK2Q86Y07 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.08□□□□□ -0.16
VRK2Q86Y07 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VRK2Q86Y07 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
VRK2Q86Y07 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
VRK2Q86Y07 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.08□□□□□ -0.16
VRK2Q86Y07 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.08□□□□□ -0.16
VRK2Q86Y07 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VRK2Q86Y07 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VRK2Q86Y07 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
VRK2Q86Y07 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VRK2Q86Y07 AL158070.2-201ENST00000623713 1621 ntBASIC14.08□□□□□ -0.16
VRK2Q86Y07 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VRK2Q86Y07 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.07□□□□□ -0.16
VRK2Q86Y07 AL138799.1-201ENST00000448213 1675 ntBASIC14.07□□□□□ -0.16
VRK2Q86Y07 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VRK2Q86Y07 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.07□□□□□ -0.16
VRK2Q86Y07 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
VRK2Q86Y07 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VRK2Q86Y07 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.07□□□□□ -0.16
VRK2Q86Y07 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VRK2Q86Y07 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VRK2Q86Y07 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
VRK2Q86Y07 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.07□□□□□ -0.16
VRK2Q86Y07 AC097359.2-201ENST00000604992 2389 ntBASIC14.07□□□□□ -0.16
VRK2Q86Y07 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VRK2Q86Y07 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
VRK2Q86Y07 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VRK2Q86Y07 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VRK2Q86Y07 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
VRK2Q86Y07 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
VRK2Q86Y07 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.07□□□□□ -0.16
VRK2Q86Y07 AL353779.1-201ENST00000434793 351 ntBASIC14.07□□□□□ -0.16
VRK2Q86Y07 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
VRK2Q86Y07 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.07□□□□□ -0.16
VRK2Q86Y07 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.07□□□□□ -0.16
VRK2Q86Y07 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.07□□□□□ -0.16
VRK2Q86Y07 AC026410.3-201ENST00000514280 936 ntBASIC14.07□□□□□ -0.16
VRK2Q86Y07 AL662799.1-202ENST00000614205 422 ntBASIC14.07□□□□□ -0.16
VRK2Q86Y07 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
VRK2Q86Y07 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.07□□□□□ -0.16
VRK2Q86Y07 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.07□□□□□ -0.16
VRK2Q86Y07 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
VRK2Q86Y07 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VRK2Q86Y07 AC093525.8-201ENST00000624099 1342 ntBASIC14.07□□□□□ -0.16
VRK2Q86Y07 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.07□□□□□ -0.16
VRK2Q86Y07 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VRK2Q86Y07 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
VRK2Q86Y07 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VRK2Q86Y07 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
VRK2Q86Y07 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VRK2Q86Y07 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VRK2Q86Y07 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.07□□□□□ -0.16
VRK2Q86Y07 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.07□□□□□ -0.16
VRK2Q86Y07 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
VRK2Q86Y07 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.07□□□□□ -0.16
VRK2Q86Y07 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.07□□□□□ -0.16
VRK2Q86Y07 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
VRK2Q86Y07 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VRK2Q86Y07 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VRK2Q86Y07 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VRK2Q86Y07 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VRK2Q86Y07 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VRK2Q86Y07 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
VRK2Q86Y07 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VRK2Q86Y07 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.06□□□□□ -0.16
VRK2Q86Y07 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.06□□□□□ -0.16
VRK2Q86Y07 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
VRK2Q86Y07 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VRK2Q86Y07 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VRK2Q86Y07 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VRK2Q86Y07 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.06□□□□□ -0.16
VRK2Q86Y07 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.06□□□□□ -0.16
VRK2Q86Y07 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
VRK2Q86Y07 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.06□□□□□ -0.16
VRK2Q86Y07 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.06□□□□□ -0.16
VRK2Q86Y07 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VRK2Q86Y07 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VRK2Q86Y07 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
VRK2Q86Y07 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms