Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.04□□□□□ -0.16
ZNF550Q7Z398 DFFBP1-201ENST00000433250 979 ntBASIC14.04□□□□□ -0.16
ZNF550Q7Z398 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.04□□□□□ -0.16
ZNF550Q7Z398 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.04□□□□□ -0.16
ZNF550Q7Z398 KRT17P7-201ENST00000451704 1104 ntBASIC14.04□□□□□ -0.16
ZNF550Q7Z398 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.04□□□□□ -0.16
ZNF550Q7Z398 RN7SL399P-201ENST00000471648 279 ntBASIC14.04□□□□□ -0.16
ZNF550Q7Z398 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.04□□□□□ -0.16
ZNF550Q7Z398 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF550Q7Z398 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.04□□□□□ -0.16
ZNF550Q7Z398 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.04□□□□□ -0.16
ZNF550Q7Z398 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.04□□□□□ -0.16
ZNF550Q7Z398 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.04□□□□□ -0.16
ZNF550Q7Z398 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.04□□□□□ -0.16
ZNF550Q7Z398 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.04□□□□□ -0.16
ZNF550Q7Z398 WASH4P-201ENST00000564273 1246 ntBASIC14.04□□□□□ -0.16
ZNF550Q7Z398 CHCHD2P3-201ENST00000603038 451 ntBASIC14.04□□□□□ -0.16
ZNF550Q7Z398 AC008494.3-201ENST00000606615 944 ntBASIC14.04□□□□□ -0.16
ZNF550Q7Z398 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.04□□□□□ -0.16
ZNF550Q7Z398 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.04□□□□□ -0.16
ZNF550Q7Z398 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF550Q7Z398 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF550Q7Z398 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF550Q7Z398 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF550Q7Z398 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF550Q7Z398 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF550Q7Z398 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF550Q7Z398 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF550Q7Z398 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
ZNF550Q7Z398 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF550Q7Z398 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.04□□□□□ -0.16
ZNF550Q7Z398 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF550Q7Z398 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF550Q7Z398 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF550Q7Z398 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF550Q7Z398 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.03□□□□□ -0.16
ZNF550Q7Z398 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF550Q7Z398 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF550Q7Z398 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF550Q7Z398 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF550Q7Z398 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
ZNF550Q7Z398 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF550Q7Z398 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
ZNF550Q7Z398 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF550Q7Z398 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF550Q7Z398 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF550Q7Z398 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF550Q7Z398 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF550Q7Z398 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF550Q7Z398 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.03□□□□□ -0.16
ZNF550Q7Z398 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF550Q7Z398 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.03□□□□□ -0.16
ZNF550Q7Z398 DGCR5-201ENST00000399539 862 ntBASIC14.03□□□□□ -0.16
ZNF550Q7Z398 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.03□□□□□ -0.16
ZNF550Q7Z398 AC093004.1-201ENST00000508850 424 ntBASIC14.03□□□□□ -0.16
ZNF550Q7Z398 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.03□□□□□ -0.16
ZNF550Q7Z398 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.03□□□□□ -0.16
ZNF550Q7Z398 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF550Q7Z398 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.03□□□□□ -0.16
ZNF550Q7Z398 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.03□□□□□ -0.16
ZNF550Q7Z398 AL049840.4-201ENST00000602422 811 ntBASIC14.03□□□□□ -0.16
ZNF550Q7Z398 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.03□□□□□ -0.16
ZNF550Q7Z398 AC007431.3-201ENST00000623221 587 ntBASIC14.03□□□□□ -0.16
ZNF550Q7Z398 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.03□□□□□ -0.16
ZNF550Q7Z398 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.03□□□□□ -0.16
ZNF550Q7Z398 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF550Q7Z398 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.03□□□□□ -0.16
ZNF550Q7Z398 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF550Q7Z398 LILRP1-201ENST00000444199 1370 ntBASIC14.03□□□□□ -0.16
ZNF550Q7Z398 DRD5P1-201ENST00000456605 1438 ntBASIC14.03□□□□□ -0.16
ZNF550Q7Z398 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.03□□□□□ -0.16
ZNF550Q7Z398 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF550Q7Z398 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
ZNF550Q7Z398 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
ZNF550Q7Z398 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF550Q7Z398 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF550Q7Z398 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.03□□□□□ -0.16
ZNF550Q7Z398 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF550Q7Z398 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.03□□□□□ -0.16
ZNF550Q7Z398 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.03□□□□□ -0.16
ZNF550Q7Z398 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
ZNF550Q7Z398 AL390755.1-201ENST00000623716 2027 ntBASIC14.03□□□□□ -0.16
ZNF550Q7Z398 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF550Q7Z398 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF550Q7Z398 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF550Q7Z398 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.03□□□□□ -0.16
ZNF550Q7Z398 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF550Q7Z398 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF550Q7Z398 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.03□□□□□ -0.16
ZNF550Q7Z398 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF550Q7Z398 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ZNF550Q7Z398 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.02□□□□□ -0.16
ZNF550Q7Z398 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ZNF550Q7Z398 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ZNF550Q7Z398 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.02□□□□□ -0.16
ZNF550Q7Z398 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.02□□□□□ -0.16
ZNF550Q7Z398 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
ZNF550Q7Z398 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ZNF550Q7Z398 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ZNF550Q7Z398 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms