Protein–RNA interactions for Protein: Q6UXN2

TREML4, Trem-like transcript 4 protein, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREML4Q6UXN2 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TREML4Q6UXN2 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
TREML4Q6UXN2 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
TREML4Q6UXN2 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TREML4Q6UXN2 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TREML4Q6UXN2 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TREML4Q6UXN2 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TREML4Q6UXN2 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC12.61□□□□□ -0.39
TREML4Q6UXN2 LINC00552-201ENST00000625151 2579 ntBASIC12.61□□□□□ -0.39
TREML4Q6UXN2 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TREML4Q6UXN2 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TREML4Q6UXN2 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
TREML4Q6UXN2 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TREML4Q6UXN2 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TREML4Q6UXN2 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TREML4Q6UXN2 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TREML4Q6UXN2 FAM220BP-201ENST00000377689 816 ntBASIC12.61□□□□□ -0.39
TREML4Q6UXN2 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
TREML4Q6UXN2 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TREML4Q6UXN2 AC240504.1-201ENST00000395709 845 ntBASIC12.61□□□□□ -0.39
TREML4Q6UXN2 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TREML4Q6UXN2 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC12.61□□□□□ -0.39
TREML4Q6UXN2 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TREML4Q6UXN2 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
TREML4Q6UXN2 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TREML4Q6UXN2 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC12.61□□□□□ -0.39
TREML4Q6UXN2 TSPAN5-202ENST00000505184 1191 ntTSL 2 BASIC12.61□□□□□ -0.39
TREML4Q6UXN2 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC12.61□□□□□ -0.39
TREML4Q6UXN2 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC12.61□□□□□ -0.39
TREML4Q6UXN2 USB1-203ENST00000539737 1212 ntTSL 2 BASIC12.61□□□□□ -0.39
TREML4Q6UXN2 AC123567.1-201ENST00000548294 1261 ntBASIC12.61□□□□□ -0.39
TREML4Q6UXN2 AL591767.1-201ENST00000557160 568 ntTSL 4 BASIC12.61□□□□□ -0.39
TREML4Q6UXN2 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC12.61□□□□□ -0.39
TREML4Q6UXN2 AC015936.2-201ENST00000593177 259 ntBASIC12.61□□□□□ -0.39
TREML4Q6UXN2 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC12.61□□□□□ -0.39
TREML4Q6UXN2 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC12.61□□□□□ -0.39
TREML4Q6UXN2 AC108673.2-201ENST00000608909 565 ntBASIC12.61□□□□□ -0.39
TREML4Q6UXN2 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TREML4Q6UXN2 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC12.61□□□□□ -0.39
TREML4Q6UXN2 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC12.61□□□□□ -0.39
TREML4Q6UXN2 AC025287.4-201ENST00000640173 1240 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
TREML4Q6UXN2 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TREML4Q6UXN2 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TREML4Q6UXN2 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TREML4Q6UXN2 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TREML4Q6UXN2 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC12.61□□□□□ -0.39
TREML4Q6UXN2 AC232323.1-201ENST00000540724 2099 ntBASIC12.61□□□□□ -0.39
TREML4Q6UXN2 REXO1L5P-201ENST00000622260 2098 ntBASIC12.61□□□□□ -0.39
TREML4Q6UXN2 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TREML4Q6UXN2 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC12.61□□□□□ -0.39
TREML4Q6UXN2 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TREML4Q6UXN2 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TREML4Q6UXN2 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
TREML4Q6UXN2 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TREML4Q6UXN2 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TREML4Q6UXN2 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TREML4Q6UXN2 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TREML4Q6UXN2 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TREML4Q6UXN2 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TREML4Q6UXN2 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TREML4Q6UXN2 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TREML4Q6UXN2 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TREML4Q6UXN2 AC018892.3-201ENST00000623986 2499 ntBASIC12.61□□□□□ -0.39
TREML4Q6UXN2 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC12.61□□□□□ -0.39
TREML4Q6UXN2 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC12.61□□□□□ -0.39
TREML4Q6UXN2 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC12.61□□□□□ -0.39
TREML4Q6UXN2 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TREML4Q6UXN2 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TREML4Q6UXN2 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TREML4Q6UXN2 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
TREML4Q6UXN2 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TREML4Q6UXN2 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
TREML4Q6UXN2 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC12.6□□□□□ -0.39
TREML4Q6UXN2 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
TREML4Q6UXN2 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TREML4Q6UXN2 AC127383.1-201ENST00000444697 1800 ntBASIC12.6□□□□□ -0.39
TREML4Q6UXN2 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC12.6□□□□□ -0.39
TREML4Q6UXN2 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
TREML4Q6UXN2 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TREML4Q6UXN2 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TREML4Q6UXN2 COCH-203ENST00000460581 2688 ntTSL 2 BASIC12.6□□□□□ -0.39
TREML4Q6UXN2 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TREML4Q6UXN2 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC12.6□□□□□ -0.39
TREML4Q6UXN2 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
TREML4Q6UXN2 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
TREML4Q6UXN2 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC12.6□□□□□ -0.39
TREML4Q6UXN2 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
TREML4Q6UXN2 AC020907.1-201ENST00000616460 1350 ntBASIC12.6□□□□□ -0.39
TREML4Q6UXN2 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TREML4Q6UXN2 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC12.6□□□□□ -0.39
TREML4Q6UXN2 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
TREML4Q6UXN2 STK33-217ENST00000534493 1895 ntTSL 2 BASIC12.6□□□□□ -0.39
TREML4Q6UXN2 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC12.6□□□□□ -0.39
TREML4Q6UXN2 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TREML4Q6UXN2 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC12.6□□□□□ -0.39
TREML4Q6UXN2 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC12.6□□□□□ -0.39
TREML4Q6UXN2 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC12.6□□□□□ -0.39
TREML4Q6UXN2 AL355994.1-201ENST00000424379 260 ntBASIC12.6□□□□□ -0.39
TREML4Q6UXN2 MTCYBP15-201ENST00000433123 1127 ntBASIC12.6□□□□□ -0.39
TREML4Q6UXN2 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms