Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.87■□□□□ 0.13
RFWD3Q6PCD5 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFWD3Q6PCD5 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFWD3Q6PCD5 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFWD3Q6PCD5 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFWD3Q6PCD5 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFWD3Q6PCD5 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFWD3Q6PCD5 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RFWD3Q6PCD5 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RFWD3Q6PCD5 RNU1-114P-201ENST00000365297 166 ntBASIC15.87■□□□□ 0.13
RFWD3Q6PCD5 ACKR1-201ENST00000368121 1240 ntBASIC15.87■□□□□ 0.13
RFWD3Q6PCD5 AC005229.1-201ENST00000392885 409 ntBASIC15.87■□□□□ 0.13
RFWD3Q6PCD5 MIR1909-201ENST00000411312 80 ntBASIC15.87■□□□□ 0.13
RFWD3Q6PCD5 AC244107.1-201ENST00000442033 332 ntBASIC15.87■□□□□ 0.13
RFWD3Q6PCD5 AL355864.2-201ENST00000447420 863 ntBASIC15.87■□□□□ 0.13
RFWD3Q6PCD5 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.87■□□□□ 0.13
RFWD3Q6PCD5 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.87■□□□□ 0.13
RFWD3Q6PCD5 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RFWD3Q6PCD5 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.87■□□□□ 0.13
RFWD3Q6PCD5 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.87■□□□□ 0.13
RFWD3Q6PCD5 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.87■□□□□ 0.13
RFWD3Q6PCD5 AC017083.2-201ENST00000608069 979 ntBASIC15.87■□□□□ 0.13
RFWD3Q6PCD5 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RFWD3Q6PCD5 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFWD3Q6PCD5 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RFWD3Q6PCD5 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
RFWD3Q6PCD5 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.87■□□□□ 0.13
RFWD3Q6PCD5 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
RFWD3Q6PCD5 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFWD3Q6PCD5 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFWD3Q6PCD5 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
RFWD3Q6PCD5 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFWD3Q6PCD5 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RFWD3Q6PCD5 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
RFWD3Q6PCD5 AC007787.1-201ENST00000588095 1583 ntBASIC15.87■□□□□ 0.13
RFWD3Q6PCD5 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.87■□□□□ 0.13
RFWD3Q6PCD5 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.87■□□□□ 0.13
RFWD3Q6PCD5 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFWD3Q6PCD5 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
RFWD3Q6PCD5 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
RFWD3Q6PCD5 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFWD3Q6PCD5 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.86■□□□□ 0.13
RFWD3Q6PCD5 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RFWD3Q6PCD5 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RFWD3Q6PCD5 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFWD3Q6PCD5 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
RFWD3Q6PCD5 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFWD3Q6PCD5 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.86■□□□□ 0.13
RFWD3Q6PCD5 AC005840.4-201ENST00000541242 2494 ntBASIC15.86■□□□□ 0.13
RFWD3Q6PCD5 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RFWD3Q6PCD5 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFWD3Q6PCD5 AC007686.3-201ENST00000619017 3487 ntBASIC15.86■□□□□ 0.13
RFWD3Q6PCD5 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
RFWD3Q6PCD5 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RFWD3Q6PCD5 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFWD3Q6PCD5 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFWD3Q6PCD5 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFWD3Q6PCD5 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFWD3Q6PCD5 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFWD3Q6PCD5 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFWD3Q6PCD5 MIR658-201ENST00000385210 100 ntBASIC15.86■□□□□ 0.13
RFWD3Q6PCD5 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
RFWD3Q6PCD5 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.86■□□□□ 0.13
RFWD3Q6PCD5 RPL5P21-201ENST00000404620 815 ntBASIC15.86■□□□□ 0.13
RFWD3Q6PCD5 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFWD3Q6PCD5 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.86■□□□□ 0.13
RFWD3Q6PCD5 KRT43P-201ENST00000434019 910 ntBASIC15.86■□□□□ 0.13
RFWD3Q6PCD5 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.86■□□□□ 0.13
RFWD3Q6PCD5 AC022210.1-201ENST00000449856 793 ntBASIC15.86■□□□□ 0.13
RFWD3Q6PCD5 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RFWD3Q6PCD5 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.86■□□□□ 0.13
RFWD3Q6PCD5 AC004066.1-201ENST00000502488 802 ntBASIC15.86■□□□□ 0.13
RFWD3Q6PCD5 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
RFWD3Q6PCD5 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.86■□□□□ 0.13
RFWD3Q6PCD5 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.86■□□□□ 0.13
RFWD3Q6PCD5 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.86■□□□□ 0.13
RFWD3Q6PCD5 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.86■□□□□ 0.13
RFWD3Q6PCD5 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
RFWD3Q6PCD5 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.86■□□□□ 0.13
RFWD3Q6PCD5 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.86■□□□□ 0.13
RFWD3Q6PCD5 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.86■□□□□ 0.13
RFWD3Q6PCD5 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.86■□□□□ 0.13
RFWD3Q6PCD5 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFWD3Q6PCD5 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFWD3Q6PCD5 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFWD3Q6PCD5 AC093525.8-201ENST00000624099 1342 ntBASIC15.86■□□□□ 0.13
RFWD3Q6PCD5 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
RFWD3Q6PCD5 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.86■□□□□ 0.13
RFWD3Q6PCD5 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFWD3Q6PCD5 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFWD3Q6PCD5 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RFWD3Q6PCD5 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFWD3Q6PCD5 AC063926.3-201ENST00000624734 5658 ntBASIC15.85■□□□□ 0.13
RFWD3Q6PCD5 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFWD3Q6PCD5 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFWD3Q6PCD5 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFWD3Q6PCD5 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFWD3Q6PCD5 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.85■□□□□ 0.13
RFWD3Q6PCD5 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFWD3Q6PCD5 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms