Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC62Q6P9F0 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC62Q6P9F0 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC62Q6P9F0 ACTG1P17-201ENST00000558391 1119 ntBASIC17.03■□□□□ 0.32
CCDC62Q6P9F0 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CCDC62Q6P9F0 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC17.03■□□□□ 0.32
CCDC62Q6P9F0 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC62Q6P9F0 AL451050.2-201ENST00000606967 682 ntBASIC17.03■□□□□ 0.32
CCDC62Q6P9F0 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC62Q6P9F0 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC62Q6P9F0 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.03■□□□□ 0.32
CCDC62Q6P9F0 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC62Q6P9F0 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC62Q6P9F0 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC62Q6P9F0 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CCDC62Q6P9F0 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC62Q6P9F0 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC62Q6P9F0 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC62Q6P9F0 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC62Q6P9F0 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC62Q6P9F0 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CCDC62Q6P9F0 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC62Q6P9F0 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC62Q6P9F0 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC62Q6P9F0 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC17.03■□□□□ 0.32
CCDC62Q6P9F0 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC17.02■□□□□ 0.32
CCDC62Q6P9F0 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC62Q6P9F0 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.02■□□□□ 0.32
CCDC62Q6P9F0 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC62Q6P9F0 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC17.02■□□□□ 0.32
CCDC62Q6P9F0 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
CCDC62Q6P9F0 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC62Q6P9F0 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
CCDC62Q6P9F0 REXO1L4P-201ENST00000605109 1937 ntBASIC17.02■□□□□ 0.32
CCDC62Q6P9F0 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC62Q6P9F0 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CCDC62Q6P9F0 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC62Q6P9F0 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CCDC62Q6P9F0 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC17.02■□□□□ 0.32
CCDC62Q6P9F0 CSH2-202ENST00000345366 598 ntTSL 5 BASIC17.02■□□□□ 0.32
CCDC62Q6P9F0 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.02■□□□□ 0.32
CCDC62Q6P9F0 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC62Q6P9F0 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC17.02■□□□□ 0.32
CCDC62Q6P9F0 AL136309.1-201ENST00000403917 691 ntBASIC17.02■□□□□ 0.32
CCDC62Q6P9F0 AC004945.1-201ENST00000416738 983 ntBASIC17.02■□□□□ 0.32
CCDC62Q6P9F0 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC17.02■□□□□ 0.32
CCDC62Q6P9F0 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CCDC62Q6P9F0 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC17.02■□□□□ 0.32
CCDC62Q6P9F0 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC17.02■□□□□ 0.32
CCDC62Q6P9F0 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC17.02■□□□□ 0.32
CCDC62Q6P9F0 NKG7-204ENST00000595217 816 ntTSL 2 BASIC17.02■□□□□ 0.32
CCDC62Q6P9F0 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CCDC62Q6P9F0 AC068587.10-201ENST00000641210 219 ntBASIC17.02■□□□□ 0.32
CCDC62Q6P9F0 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC62Q6P9F0 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC17.02■□□□□ 0.32
CCDC62Q6P9F0 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC62Q6P9F0 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC62Q6P9F0 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC62Q6P9F0 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC62Q6P9F0 AP000593.2-201ENST00000542775 1433 ntBASIC17.02■□□□□ 0.31
CCDC62Q6P9F0 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC62Q6P9F0 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
CCDC62Q6P9F0 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC62Q6P9F0 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC62Q6P9F0 AC105917.1-201ENST00000506637 2539 ntBASIC17.02■□□□□ 0.31
CCDC62Q6P9F0 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC17.02■□□□□ 0.31
CCDC62Q6P9F0 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC62Q6P9F0 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC17.01■□□□□ 0.31
CCDC62Q6P9F0 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC17.01■□□□□ 0.31
CCDC62Q6P9F0 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC62Q6P9F0 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
CCDC62Q6P9F0 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC62Q6P9F0 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC62Q6P9F0 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC17.01■□□□□ 0.31
CCDC62Q6P9F0 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.01■□□□□ 0.31
CCDC62Q6P9F0 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CCDC62Q6P9F0 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC62Q6P9F0 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC62Q6P9F0 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC62Q6P9F0 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CCDC62Q6P9F0 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC62Q6P9F0 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.01■□□□□ 0.31
CCDC62Q6P9F0 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC62Q6P9F0 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC62Q6P9F0 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC62Q6P9F0 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC62Q6P9F0 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC17.01■□□□□ 0.31
CCDC62Q6P9F0 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC62Q6P9F0 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
CCDC62Q6P9F0 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC17.01■□□□□ 0.31
CCDC62Q6P9F0 AL354877.1-201ENST00000424412 413 ntBASIC17.01■□□□□ 0.31
CCDC62Q6P9F0 REEP1-202ENST00000453231 940 ntTSL 2 BASIC17.01■□□□□ 0.31
CCDC62Q6P9F0 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC17.01■□□□□ 0.31
CCDC62Q6P9F0 HIST2H2BC-201ENST00000498492 580 ntBASIC17.01■□□□□ 0.31
CCDC62Q6P9F0 AC005730.2-201ENST00000564549 1184 ntBASIC17.01■□□□□ 0.31
CCDC62Q6P9F0 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC62Q6P9F0 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC17.01■□□□□ 0.31
CCDC62Q6P9F0 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC17.01■□□□□ 0.31
CCDC62Q6P9F0 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC62Q6P9F0 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms