Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHROOM1Q2M3G4 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SHROOM1Q2M3G4 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SHROOM1Q2M3G4 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHROOM1Q2M3G4 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.54■□□□□ 0.4
SHROOM1Q2M3G4 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHROOM1Q2M3G4 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.54■□□□□ 0.4
SHROOM1Q2M3G4 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.54■□□□□ 0.4
SHROOM1Q2M3G4 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC17.53■□□□□ 0.4
SHROOM1Q2M3G4 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHROOM1Q2M3G4 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC17.53■□□□□ 0.4
SHROOM1Q2M3G4 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHROOM1Q2M3G4 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
SHROOM1Q2M3G4 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.53■□□□□ 0.4
SHROOM1Q2M3G4 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHROOM1Q2M3G4 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHROOM1Q2M3G4 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHROOM1Q2M3G4 MBLAC2-202ENST00000514906 1936 ntBASIC17.53■□□□□ 0.4
SHROOM1Q2M3G4 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SHROOM1Q2M3G4 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC17.53■□□□□ 0.4
SHROOM1Q2M3G4 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
SHROOM1Q2M3G4 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHROOM1Q2M3G4 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC17.53■□□□□ 0.4
SHROOM1Q2M3G4 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC17.53■□□□□ 0.4
SHROOM1Q2M3G4 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHROOM1Q2M3G4 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC17.53■□□□□ 0.4
SHROOM1Q2M3G4 SLC16A6P1-201ENST00000413214 1059 ntBASIC17.53■□□□□ 0.4
SHROOM1Q2M3G4 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SHROOM1Q2M3G4 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC17.53■□□□□ 0.4
SHROOM1Q2M3G4 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHROOM1Q2M3G4 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC17.53■□□□□ 0.4
SHROOM1Q2M3G4 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC17.53■□□□□ 0.4
SHROOM1Q2M3G4 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC17.53■□□□□ 0.4
SHROOM1Q2M3G4 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC17.53■□□□□ 0.4
SHROOM1Q2M3G4 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC17.53■□□□□ 0.4
SHROOM1Q2M3G4 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC17.53■□□□□ 0.4
SHROOM1Q2M3G4 DUX4L46-201ENST00000566845 751 ntBASIC17.53■□□□□ 0.4
SHROOM1Q2M3G4 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SHROOM1Q2M3G4 CDK7-214ENST00000626796 358 ntTSL 5 BASIC17.53■□□□□ 0.4
SHROOM1Q2M3G4 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC17.53■□□□□ 0.4
SHROOM1Q2M3G4 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC17.53■□□□□ 0.4
SHROOM1Q2M3G4 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SHROOM1Q2M3G4 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHROOM1Q2M3G4 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
SHROOM1Q2M3G4 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
SHROOM1Q2M3G4 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHROOM1Q2M3G4 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHROOM1Q2M3G4 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
SHROOM1Q2M3G4 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC17.53■□□□□ 0.4
SHROOM1Q2M3G4 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SHROOM1Q2M3G4 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHROOM1Q2M3G4 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHROOM1Q2M3G4 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHROOM1Q2M3G4 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SHROOM1Q2M3G4 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.53■□□□□ 0.4
SHROOM1Q2M3G4 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHROOM1Q2M3G4 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SHROOM1Q2M3G4 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
SHROOM1Q2M3G4 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SHROOM1Q2M3G4 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC17.52■□□□□ 0.4
SHROOM1Q2M3G4 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SHROOM1Q2M3G4 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHROOM1Q2M3G4 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.52■□□□□ 0.4
SHROOM1Q2M3G4 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHROOM1Q2M3G4 AL162727.3-201ENST00000635661 2787 ntBASIC17.52■□□□□ 0.4
SHROOM1Q2M3G4 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHROOM1Q2M3G4 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC17.52■□□□□ 0.4
SHROOM1Q2M3G4 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHROOM1Q2M3G4 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
SHROOM1Q2M3G4 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SHROOM1Q2M3G4 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.52■□□□□ 0.4
SHROOM1Q2M3G4 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
SHROOM1Q2M3G4 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHROOM1Q2M3G4 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHROOM1Q2M3G4 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHROOM1Q2M3G4 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHROOM1Q2M3G4 AK6-201ENST00000380818 1183 ntTSL 2 BASIC17.52■□□□□ 0.4
SHROOM1Q2M3G4 VDAC1P1-201ENST00000439229 848 ntBASIC17.52■□□□□ 0.4
SHROOM1Q2M3G4 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC17.52■□□□□ 0.4
SHROOM1Q2M3G4 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC17.52■□□□□ 0.4
SHROOM1Q2M3G4 NUP210P1-202ENST00000504322 710 ntBASIC17.52■□□□□ 0.4
SHROOM1Q2M3G4 AC024681.1-201ENST00000521917 487 ntBASIC17.52■□□□□ 0.4
SHROOM1Q2M3G4 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC17.52■□□□□ 0.4
SHROOM1Q2M3G4 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC17.52■□□□□ 0.4
SHROOM1Q2M3G4 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC17.52■□□□□ 0.4
SHROOM1Q2M3G4 AC091544.8-201ENST00000619490 361 ntBASIC17.52■□□□□ 0.4
SHROOM1Q2M3G4 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHROOM1Q2M3G4 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.52■□□□□ 0.4
SHROOM1Q2M3G4 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC17.52■□□□□ 0.4
SHROOM1Q2M3G4 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.4
SHROOM1Q2M3G4 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC17.52■□□□□ 0.4
SHROOM1Q2M3G4 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHROOM1Q2M3G4 MROH4P-201ENST00000431302 1578 ntBASIC17.52■□□□□ 0.39
SHROOM1Q2M3G4 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SHROOM1Q2M3G4 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SHROOM1Q2M3G4 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SHROOM1Q2M3G4 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SHROOM1Q2M3G4 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SHROOM1Q2M3G4 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SHROOM1Q2M3G4 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms