Protein–RNA interactions for Protein: Q08E93

FAM27E3, Protein FAM27E3, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM27E3Q08E93 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
FAM27E3Q08E93 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.17□□□□□ -0.3
FAM27E3Q08E93 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC13.17□□□□□ -0.3
FAM27E3Q08E93 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC13.17□□□□□ -0.3
FAM27E3Q08E93 ATP6V0CP2-201ENST00000469409 207 ntBASIC13.17□□□□□ -0.3
FAM27E3Q08E93 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC13.17□□□□□ -0.3
FAM27E3Q08E93 SCARNA20.5-201ENST00000516991 142 ntBASIC13.17□□□□□ -0.3
FAM27E3Q08E93 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC13.17□□□□□ -0.3
FAM27E3Q08E93 AC005730.2-201ENST00000564549 1184 ntBASIC13.17□□□□□ -0.3
FAM27E3Q08E93 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
FAM27E3Q08E93 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
FAM27E3Q08E93 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC13.17□□□□□ -0.3
FAM27E3Q08E93 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FAM27E3Q08E93 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.17□□□□□ -0.3
FAM27E3Q08E93 NORAD-201ENST00000565493 5339 ntBASIC13.17□□□□□ -0.3
FAM27E3Q08E93 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.17□□□□□ -0.3
FAM27E3Q08E93 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
FAM27E3Q08E93 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FAM27E3Q08E93 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
FAM27E3Q08E93 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
FAM27E3Q08E93 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
FAM27E3Q08E93 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
FAM27E3Q08E93 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
FAM27E3Q08E93 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
FAM27E3Q08E93 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
FAM27E3Q08E93 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
FAM27E3Q08E93 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FAM27E3Q08E93 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
FAM27E3Q08E93 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
FAM27E3Q08E93 AC020910.5-201ENST00000623668 1865 ntBASIC13.16□□□□□ -0.3
FAM27E3Q08E93 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.16□□□□□ -0.3
FAM27E3Q08E93 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM27E3Q08E93 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM27E3Q08E93 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
FAM27E3Q08E93 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM27E3Q08E93 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC13.16□□□□□ -0.3
FAM27E3Q08E93 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
FAM27E3Q08E93 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
FAM27E3Q08E93 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM27E3Q08E93 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.16□□□□□ -0.3
FAM27E3Q08E93 AP000593.2-201ENST00000542775 1433 ntBASIC13.16□□□□□ -0.3
FAM27E3Q08E93 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.16□□□□□ -0.3
FAM27E3Q08E93 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM27E3Q08E93 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
FAM27E3Q08E93 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM27E3Q08E93 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM27E3Q08E93 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM27E3Q08E93 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC13.16□□□□□ -0.3
FAM27E3Q08E93 CSH2-202ENST00000345366 598 ntTSL 5 BASIC13.16□□□□□ -0.3
FAM27E3Q08E93 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM27E3Q08E93 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM27E3Q08E93 SLC25A24P2-201ENST00000415059 510 ntBASIC13.16□□□□□ -0.3
FAM27E3Q08E93 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC13.16□□□□□ -0.3
FAM27E3Q08E93 AC005077.2-201ENST00000449786 690 ntBASIC13.16□□□□□ -0.3
FAM27E3Q08E93 BX284668.4-201ENST00000453917 508 ntBASIC13.16□□□□□ -0.3
FAM27E3Q08E93 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
FAM27E3Q08E93 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC13.16□□□□□ -0.3
FAM27E3Q08E93 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.16□□□□□ -0.3
FAM27E3Q08E93 NEU3-202ENST00000526068 431 ntTSL 2 BASIC13.16□□□□□ -0.3
FAM27E3Q08E93 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC13.16□□□□□ -0.3
FAM27E3Q08E93 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC13.16□□□□□ -0.3
FAM27E3Q08E93 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM27E3Q08E93 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.16□□□□□ -0.3
FAM27E3Q08E93 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC13.16□□□□□ -0.3
FAM27E3Q08E93 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
FAM27E3Q08E93 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
FAM27E3Q08E93 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
FAM27E3Q08E93 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.16□□□□□ -0.3
FAM27E3Q08E93 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
FAM27E3Q08E93 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
FAM27E3Q08E93 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM27E3Q08E93 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
FAM27E3Q08E93 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
FAM27E3Q08E93 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM27E3Q08E93 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM27E3Q08E93 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM27E3Q08E93 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
FAM27E3Q08E93 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
FAM27E3Q08E93 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC13.16□□□□□ -0.3
FAM27E3Q08E93 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
FAM27E3Q08E93 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.16□□□□□ -0.3
FAM27E3Q08E93 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM27E3Q08E93 AC112693.3-201ENST00000624819 1983 ntBASIC13.16□□□□□ -0.3
FAM27E3Q08E93 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.16□□□□□ -0.3
FAM27E3Q08E93 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
FAM27E3Q08E93 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM27E3Q08E93 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM27E3Q08E93 AGK-211ENST00000629555 2765 ntTSL 5 BASIC13.15□□□□□ -0.3
FAM27E3Q08E93 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
FAM27E3Q08E93 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
FAM27E3Q08E93 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
FAM27E3Q08E93 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
FAM27E3Q08E93 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC13.15□□□□□ -0.3
FAM27E3Q08E93 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.15□□□□□ -0.3
FAM27E3Q08E93 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC13.15□□□□□ -0.3
FAM27E3Q08E93 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.15□□□□□ -0.3
FAM27E3Q08E93 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
FAM27E3Q08E93 AP000845.1-201ENST00000581677 2131 ntBASIC13.15□□□□□ -0.3
FAM27E3Q08E93 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
FAM27E3Q08E93 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms