Protein–RNA interactions for Protein: Q08170

SRSF4, Serine/arginine-rich splicing factor 4, humanhuman

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4Q08170 GRAMD4P3-201ENST00000621665 1669 ntBASIC12.93□□□□□ -0.34
SRSF4Q08170 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC12.92□□□□□ -0.34
SRSF4Q08170 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC12.92□□□□□ -0.34
SRSF4Q08170 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.92□□□□□ -0.34
SRSF4Q08170 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRSF4Q08170 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC12.92□□□□□ -0.34
SRSF4Q08170 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC12.92□□□□□ -0.34
SRSF4Q08170 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRSF4Q08170 FES-203ENST00000394302 2133 ntTSL 5 BASIC12.92□□□□□ -0.34
SRSF4Q08170 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRSF4Q08170 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRSF4Q08170 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRSF4Q08170 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
SRSF4Q08170 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRSF4Q08170 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRSF4Q08170 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRSF4Q08170 HADH-202ENST00000403312 1752 ntTSL 5 BASIC12.92□□□□□ -0.34
SRSF4Q08170 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.92□□□□□ -0.34
SRSF4Q08170 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC12.92□□□□□ -0.34
SRSF4Q08170 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRSF4Q08170 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRSF4Q08170 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRSF4Q08170 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRSF4Q08170 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
SRSF4Q08170 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRSF4Q08170 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRSF4Q08170 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRSF4Q08170 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
SRSF4Q08170 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
SRSF4Q08170 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
SRSF4Q08170 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRSF4Q08170 RPL37AP1-201ENST00000412502 279 ntBASIC12.92□□□□□ -0.34
SRSF4Q08170 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC12.92□□□□□ -0.34
SRSF4Q08170 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SRSF4Q08170 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
SRSF4Q08170 AL122018.1-201ENST00000446607 2310 ntBASIC12.92□□□□□ -0.34
SRSF4Q08170 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SRSF4Q08170 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC12.92□□□□□ -0.34
SRSF4Q08170 AC009477.1-201ENST00000452936 217 ntBASIC12.92□□□□□ -0.34
SRSF4Q08170 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SRSF4Q08170 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRSF4Q08170 LY6E-204ENST00000519546 971 ntTSL 2 BASIC12.92□□□□□ -0.34
SRSF4Q08170 AC243562.2-201ENST00000561247 970 ntBASIC12.92□□□□□ -0.34
SRSF4Q08170 AC010336.2-201ENST00000564226 506 ntBASIC12.92□□□□□ -0.34
SRSF4Q08170 TP53TG3HP-202ENST00000569755 579 ntBASIC12.92□□□□□ -0.34
SRSF4Q08170 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC12.92□□□□□ -0.34
SRSF4Q08170 IFT20-216ENST00000588477 774 ntTSL 5 BASIC12.92□□□□□ -0.34
SRSF4Q08170 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRSF4Q08170 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
SRSF4Q08170 CU639417.3-201ENST00000624240 1404 ntBASIC12.92□□□□□ -0.34
SRSF4Q08170 AC099521.3-201ENST00000624251 2938 ntBASIC12.92□□□□□ -0.34
SRSF4Q08170 AC004840.1-201ENST00000636359 365 ntBASIC12.92□□□□□ -0.34
SRSF4Q08170 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
SRSF4Q08170 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRSF4Q08170 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SRSF4Q08170 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC12.92□□□□□ -0.34
SRSF4Q08170 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC12.92□□□□□ -0.34
SRSF4Q08170 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRSF4Q08170 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
SRSF4Q08170 AL356585.2-201ENST00000625078 2396 ntBASIC12.92□□□□□ -0.34
SRSF4Q08170 PPT1-213ENST00000641319 2388 ntBASIC12.92□□□□□ -0.34
SRSF4Q08170 AC018442.1-201ENST00000421439 2061 ntBASIC12.92□□□□□ -0.34
SRSF4Q08170 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC12.92□□□□□ -0.34
SRSF4Q08170 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SRSF4Q08170 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRSF4Q08170 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SRSF4Q08170 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SRSF4Q08170 AC138969.3-201ENST00000546612 1459 ntBASIC12.91□□□□□ -0.34
SRSF4Q08170 AC138932.2-201ENST00000548268 1459 ntBASIC12.91□□□□□ -0.34
SRSF4Q08170 AC126755.4-201ENST00000549796 1459 ntBASIC12.91□□□□□ -0.34
SRSF4Q08170 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.91□□□□□ -0.34
SRSF4Q08170 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SRSF4Q08170 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
SRSF4Q08170 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SRSF4Q08170 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC12.91□□□□□ -0.34
SRSF4Q08170 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC12.91□□□□□ -0.34
SRSF4Q08170 BNIP3P1-202ENST00000550043 1585 ntBASIC12.91□□□□□ -0.34
SRSF4Q08170 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
SRSF4Q08170 AL691432.1-201ENST00000596308 1422 ntBASIC12.91□□□□□ -0.34
SRSF4Q08170 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC12.91□□□□□ -0.34
SRSF4Q08170 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SRSF4Q08170 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC12.91□□□□□ -0.34
SRSF4Q08170 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
SRSF4Q08170 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
SRSF4Q08170 DGCR5-201ENST00000399539 862 ntBASIC12.91□□□□□ -0.34
SRSF4Q08170 PP14571-201ENST00000404327 934 ntTSL 2 BASIC12.91□□□□□ -0.34
SRSF4Q08170 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC12.91□□□□□ -0.34
SRSF4Q08170 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC12.91□□□□□ -0.34
SRSF4Q08170 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
SRSF4Q08170 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC12.91□□□□□ -0.34
SRSF4Q08170 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC12.91□□□□□ -0.34
SRSF4Q08170 API5-211ENST00000534695 560 ntTSL 5 BASIC12.91□□□□□ -0.34
SRSF4Q08170 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC12.91□□□□□ -0.34
SRSF4Q08170 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC12.91□□□□□ -0.34
SRSF4Q08170 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC12.91□□□□□ -0.34
SRSF4Q08170 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
SRSF4Q08170 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC12.91□□□□□ -0.34
SRSF4Q08170 AL589739.1-201ENST00000607720 493 ntBASIC12.91□□□□□ -0.34
SRSF4Q08170 TEX28P1-201ENST00000613479 1221 ntBASIC12.91□□□□□ -0.34
SRSF4Q08170 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms