Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.49□□□□□ -0.25
NKX6-1P78426 PTP4A1P2-201ENST00000546033 454 ntBASIC13.49□□□□□ -0.25
NKX6-1P78426 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.49□□□□□ -0.25
NKX6-1P78426 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.49□□□□□ -0.25
NKX6-1P78426 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
NKX6-1P78426 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.49□□□□□ -0.25
NKX6-1P78426 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC13.49□□□□□ -0.25
NKX6-1P78426 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
NKX6-1P78426 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NKX6-1P78426 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
NKX6-1P78426 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NKX6-1P78426 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
NKX6-1P78426 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NKX6-1P78426 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NKX6-1P78426 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.49□□□□□ -0.25
NKX6-1P78426 AC006058.4-201ENST00000624016 1670 ntBASIC13.49□□□□□ -0.25
NKX6-1P78426 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NKX6-1P78426 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.49□□□□□ -0.25
NKX6-1P78426 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
NKX6-1P78426 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NKX6-1P78426 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NKX6-1P78426 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
NKX6-1P78426 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.49□□□□□ -0.25
NKX6-1P78426 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
NKX6-1P78426 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NKX6-1P78426 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NKX6-1P78426 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
NKX6-1P78426 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
NKX6-1P78426 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
NKX6-1P78426 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
NKX6-1P78426 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.48□□□□□ -0.25
NKX6-1P78426 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NKX6-1P78426 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NKX6-1P78426 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.48□□□□□ -0.25
NKX6-1P78426 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NKX6-1P78426 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.48□□□□□ -0.25
NKX6-1P78426 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NKX6-1P78426 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
NKX6-1P78426 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
NKX6-1P78426 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NKX6-1P78426 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NKX6-1P78426 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NKX6-1P78426 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NKX6-1P78426 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.48□□□□□ -0.25
NKX6-1P78426 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.48□□□□□ -0.25
NKX6-1P78426 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.48□□□□□ -0.25
NKX6-1P78426 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.48□□□□□ -0.25
NKX6-1P78426 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC13.48□□□□□ -0.25
NKX6-1P78426 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC13.48□□□□□ -0.25
NKX6-1P78426 RPL7P3-201ENST00000441388 714 ntBASIC13.48□□□□□ -0.25
NKX6-1P78426 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.48□□□□□ -0.25
NKX6-1P78426 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.48□□□□□ -0.25
NKX6-1P78426 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.48□□□□□ -0.25
NKX6-1P78426 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.48□□□□□ -0.25
NKX6-1P78426 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.48□□□□□ -0.25
NKX6-1P78426 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.48□□□□□ -0.25
NKX6-1P78426 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.48□□□□□ -0.25
NKX6-1P78426 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC13.48□□□□□ -0.25
NKX6-1P78426 IGHV3OR16-16-201ENST00000563644 343 ntBASIC13.48□□□□□ -0.25
NKX6-1P78426 AC015910.1-201ENST00000579400 975 ntBASIC13.48□□□□□ -0.25
NKX6-1P78426 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NKX6-1P78426 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
NKX6-1P78426 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
NKX6-1P78426 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NKX6-1P78426 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NKX6-1P78426 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NKX6-1P78426 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
NKX6-1P78426 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NKX6-1P78426 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.48□□□□□ -0.25
NKX6-1P78426 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.48□□□□□ -0.25
NKX6-1P78426 ST20-AS1-201ENST00000560255 4223 ntBASIC13.48□□□□□ -0.25
NKX6-1P78426 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
NKX6-1P78426 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NKX6-1P78426 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NKX6-1P78426 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
NKX6-1P78426 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX6-1P78426 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX6-1P78426 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.47□□□□□ -0.25
NKX6-1P78426 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
NKX6-1P78426 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX6-1P78426 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX6-1P78426 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.47□□□□□ -0.25
NKX6-1P78426 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NKX6-1P78426 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.47□□□□□ -0.25
NKX6-1P78426 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.47□□□□□ -0.25
NKX6-1P78426 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.47□□□□□ -0.25
NKX6-1P78426 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX6-1P78426 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.47□□□□□ -0.25
NKX6-1P78426 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
NKX6-1P78426 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.47□□□□□ -0.25
NKX6-1P78426 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.47□□□□□ -0.25
NKX6-1P78426 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX6-1P78426 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.47□□□□□ -0.25
NKX6-1P78426 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX6-1P78426 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX6-1P78426 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX6-1P78426 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX6-1P78426 TNRC18P2-201ENST00000417666 2714 ntBASIC13.47□□□□□ -0.25
NKX6-1P78426 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX6-1P78426 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms