Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.92■□□□□ 0.14
IRX4P78413 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
IRX4P78413 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
IRX4P78413 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.92■□□□□ 0.14
IRX4P78413 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.92■□□□□ 0.14
IRX4P78413 MIR4321-201ENST00000592276 80 ntBASIC15.92■□□□□ 0.14
IRX4P78413 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.92■□□□□ 0.14
IRX4P78413 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
IRX4P78413 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
IRX4P78413 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
IRX4P78413 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.92■□□□□ 0.14
IRX4P78413 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
IRX4P78413 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
IRX4P78413 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
IRX4P78413 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
IRX4P78413 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
IRX4P78413 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.92■□□□□ 0.14
IRX4P78413 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
IRX4P78413 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
IRX4P78413 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
IRX4P78413 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
IRX4P78413 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
IRX4P78413 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
IRX4P78413 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
IRX4P78413 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
IRX4P78413 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
IRX4P78413 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.91■□□□□ 0.14
IRX4P78413 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
IRX4P78413 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
IRX4P78413 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.91■□□□□ 0.14
IRX4P78413 PDIA3P1-201ENST00000471856 1510 ntBASIC15.91■□□□□ 0.14
IRX4P78413 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
IRX4P78413 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
IRX4P78413 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
IRX4P78413 AC245100.5-201ENST00000452108 331 ntBASIC15.91■□□□□ 0.14
IRX4P78413 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.91■□□□□ 0.14
IRX4P78413 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.91■□□□□ 0.14
IRX4P78413 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.91■□□□□ 0.14
IRX4P78413 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.91■□□□□ 0.14
IRX4P78413 SLC25A47P1-201ENST00000531577 414 ntBASIC15.91■□□□□ 0.14
IRX4P78413 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.91■□□□□ 0.14
IRX4P78413 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15.91■□□□□ 0.14
IRX4P78413 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.91■□□□□ 0.14
IRX4P78413 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.91■□□□□ 0.14
IRX4P78413 AC233724.13-201ENST00000598383 410 ntBASIC15.91■□□□□ 0.14
IRX4P78413 AC074044.1-201ENST00000609673 707 ntBASIC15.91■□□□□ 0.14
IRX4P78413 RPSAP52-203ENST00000622976 1023 ntBASIC15.91■□□□□ 0.14
IRX4P78413 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.91■□□□□ 0.14
IRX4P78413 ST20-AS1-201ENST00000560255 4223 ntBASIC15.91■□□□□ 0.14
IRX4P78413 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
IRX4P78413 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
IRX4P78413 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
IRX4P78413 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.91■□□□□ 0.14
IRX4P78413 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.91■□□□□ 0.14
IRX4P78413 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.91■□□□□ 0.14
IRX4P78413 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.91■□□□□ 0.14
IRX4P78413 AC112693.3-201ENST00000624819 1983 ntBASIC15.91■□□□□ 0.14
IRX4P78413 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.91■□□□□ 0.14
IRX4P78413 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
IRX4P78413 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.91■□□□□ 0.14
IRX4P78413 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
IRX4P78413 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
IRX4P78413 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
IRX4P78413 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
IRX4P78413 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
IRX4P78413 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
IRX4P78413 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
IRX4P78413 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
IRX4P78413 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.9■□□□□ 0.14
IRX4P78413 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.9■□□□□ 0.14
IRX4P78413 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
IRX4P78413 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
IRX4P78413 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
IRX4P78413 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
IRX4P78413 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.9■□□□□ 0.14
IRX4P78413 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC15.9■□□□□ 0.14
IRX4P78413 KLF2P4-201ENST00000451959 1225 ntBASIC15.9■□□□□ 0.14
IRX4P78413 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.9■□□□□ 0.14
IRX4P78413 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.9■□□□□ 0.14
IRX4P78413 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC15.9■□□□□ 0.14
IRX4P78413 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC15.9■□□□□ 0.14
IRX4P78413 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
IRX4P78413 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
IRX4P78413 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.9■□□□□ 0.14
IRX4P78413 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.9■□□□□ 0.14
IRX4P78413 AC068587.10-201ENST00000641210 219 ntBASIC15.9■□□□□ 0.14
IRX4P78413 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.9■□□□□ 0.14
IRX4P78413 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
IRX4P78413 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.9■□□□□ 0.14
IRX4P78413 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
IRX4P78413 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
IRX4P78413 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
IRX4P78413 AP001282.1-201ENST00000531301 1499 ntBASIC15.9■□□□□ 0.14
IRX4P78413 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.9■□□□□ 0.14
IRX4P78413 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.9■□□□□ 0.14
IRX4P78413 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
IRX4P78413 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
IRX4P78413 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.9■□□□□ 0.14
IRX4P78413 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
IRX4P78413 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms