Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LMO4P61968 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
LMO4P61968 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LMO4P61968 RBM38-204ENST00000371219 760 ntTSL 2 BASIC12.35□□□□□ -0.43
LMO4P61968 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LMO4P61968 NPPA-201ENST00000376476 728 ntTSL 3 BASIC12.35□□□□□ -0.43
LMO4P61968 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
LMO4P61968 MIR769-201ENST00000390225 118 ntBASIC12.35□□□□□ -0.43
LMO4P61968 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
LMO4P61968 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LMO4P61968 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC12.35□□□□□ -0.43
LMO4P61968 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC12.35□□□□□ -0.43
LMO4P61968 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC12.35□□□□□ -0.43
LMO4P61968 SPTLC1P5-201ENST00000450718 252 ntBASIC12.35□□□□□ -0.43
LMO4P61968 OARD1-204ENST00000464633 717 ntTSL 2 BASIC12.35□□□□□ -0.43
LMO4P61968 TSACC-208ENST00000481479 741 ntTSL 2 BASIC12.35□□□□□ -0.43
LMO4P61968 AC106794.1-201ENST00000506935 792 ntBASIC12.35□□□□□ -0.43
LMO4P61968 SDHD-202ENST00000525291 790 ntTSL 3 BASIC12.35□□□□□ -0.43
LMO4P61968 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC12.35□□□□□ -0.43
LMO4P61968 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LMO4P61968 CSH2-206ENST00000560142 749 ntTSL 5 BASIC12.35□□□□□ -0.43
LMO4P61968 AC013355.1-201ENST00000562625 723 ntBASIC12.35□□□□□ -0.43
LMO4P61968 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC12.35□□□□□ -0.43
LMO4P61968 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC12.35□□□□□ -0.43
LMO4P61968 RN7SL774P-201ENST00000577467 290 ntBASIC12.35□□□□□ -0.43
LMO4P61968 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC12.35□□□□□ -0.43
LMO4P61968 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC12.35□□□□□ -0.43
LMO4P61968 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
LMO4P61968 PCBP2-OT1-201ENST00000634357 590 ntBASIC12.35□□□□□ -0.43
LMO4P61968 AC068587.8-201ENST00000641239 219 ntBASIC12.35□□□□□ -0.43
LMO4P61968 AC138627.1-207ENST00000641560 1006 ntBASIC12.35□□□□□ -0.43
LMO4P61968 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.35□□□□□ -0.43
LMO4P61968 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
LMO4P61968 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LMO4P61968 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC12.35□□□□□ -0.43
LMO4P61968 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
LMO4P61968 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LMO4P61968 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
LMO4P61968 SALL4P5-201ENST00000419001 1760 ntBASIC12.35□□□□□ -0.43
LMO4P61968 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC12.35□□□□□ -0.43
LMO4P61968 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LMO4P61968 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LMO4P61968 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LMO4P61968 PAUPAR-201ENST00000630360 2965 ntBASIC12.35□□□□□ -0.43
LMO4P61968 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LMO4P61968 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LMO4P61968 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LMO4P61968 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC12.35□□□□□ -0.43
LMO4P61968 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
LMO4P61968 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
LMO4P61968 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LMO4P61968 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
LMO4P61968 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LMO4P61968 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LMO4P61968 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LMO4P61968 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
LMO4P61968 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LMO4P61968 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LMO4P61968 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LMO4P61968 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LMO4P61968 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
LMO4P61968 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LMO4P61968 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
LMO4P61968 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LMO4P61968 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LMO4P61968 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC12.34□□□□□ -0.43
LMO4P61968 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.34□□□□□ -0.43
LMO4P61968 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LMO4P61968 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
LMO4P61968 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
LMO4P61968 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LMO4P61968 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
LMO4P61968 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LMO4P61968 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LMO4P61968 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LMO4P61968 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
LMO4P61968 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC12.34□□□□□ -0.43
LMO4P61968 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LMO4P61968 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LMO4P61968 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC12.34□□□□□ -0.43
LMO4P61968 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
LMO4P61968 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC12.34□□□□□ -0.43
LMO4P61968 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC12.34□□□□□ -0.43
LMO4P61968 ALG3P1-201ENST00000508806 1114 ntBASIC12.34□□□□□ -0.43
LMO4P61968 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC12.34□□□□□ -0.43
LMO4P61968 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LMO4P61968 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
LMO4P61968 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LMO4P61968 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC12.34□□□□□ -0.43
LMO4P61968 KLK3-207ENST00000595952 969 ntTSL 3 BASIC12.34□□□□□ -0.43
LMO4P61968 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC12.34□□□□□ -0.43
LMO4P61968 BX088702.1-201ENST00000610784 235 ntBASIC12.34□□□□□ -0.43
LMO4P61968 AC100757.4-201ENST00000626934 759 ntBASIC12.34□□□□□ -0.43
LMO4P61968 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC12.34□□□□□ -0.43
LMO4P61968 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
LMO4P61968 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
LMO4P61968 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LMO4P61968 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LMO4P61968 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LMO4P61968 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms