Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
CDH12P55289 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH12P55289 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CDH12P55289 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.23□□□□□ -0.13
CDH12P55289 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CDH12P55289 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CDH12P55289 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDH12P55289 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CDH12P55289 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CDH12P55289 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDH12P55289 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDH12P55289 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDH12P55289 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CDH12P55289 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
CDH12P55289 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
CDH12P55289 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDH12P55289 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDH12P55289 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.22□□□□□ -0.13
CDH12P55289 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
CDH12P55289 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDH12P55289 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
CDH12P55289 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDH12P55289 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDH12P55289 KRT18P13-201ENST00000400056 1290 ntBASIC14.22□□□□□ -0.13
CDH12P55289 TSEN15P1-201ENST00000423257 515 ntBASIC14.22□□□□□ -0.13
CDH12P55289 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.22□□□□□ -0.13
CDH12P55289 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDH12P55289 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDH12P55289 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.22□□□□□ -0.13
CDH12P55289 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CDH12P55289 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.22□□□□□ -0.13
CDH12P55289 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.22□□□□□ -0.13
CDH12P55289 AL138828.2-201ENST00000615812 383 ntBASIC14.22□□□□□ -0.13
CDH12P55289 SPDYE12P-201ENST00000618416 771 ntBASIC14.22□□□□□ -0.13
CDH12P55289 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.22□□□□□ -0.13
CDH12P55289 Z92544.3-201ENST00000624747 417 ntBASIC14.22□□□□□ -0.13
CDH12P55289 AF228730.6-201ENST00000641497 218 ntBASIC14.22□□□□□ -0.13
CDH12P55289 AC084121.3-201ENST00000641716 218 ntBASIC14.22□□□□□ -0.13
CDH12P55289 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDH12P55289 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.22□□□□□ -0.13
CDH12P55289 AC018442.1-201ENST00000421439 2061 ntBASIC14.22□□□□□ -0.13
CDH12P55289 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDH12P55289 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDH12P55289 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.22□□□□□ -0.13
CDH12P55289 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDH12P55289 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CDH12P55289 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
CDH12P55289 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDH12P55289 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDH12P55289 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDH12P55289 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDH12P55289 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.22□□□□□ -0.13
CDH12P55289 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDH12P55289 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDH12P55289 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDH12P55289 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDH12P55289 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.22□□□□□ -0.13
CDH12P55289 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDH12P55289 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CDH12P55289 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDH12P55289 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
CDH12P55289 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDH12P55289 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDH12P55289 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.21□□□□□ -0.13
CDH12P55289 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CDH12P55289 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
CDH12P55289 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDH12P55289 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.21□□□□□ -0.13
CDH12P55289 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.21□□□□□ -0.13
CDH12P55289 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
CDH12P55289 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CDH12P55289 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDH12P55289 AP001267.2-201ENST00000532619 2086 ntBASIC14.21□□□□□ -0.13
CDH12P55289 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDH12P55289 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CDH12P55289 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.21□□□□□ -0.13
CDH12P55289 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.21□□□□□ -0.13
CDH12P55289 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CDH12P55289 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDH12P55289 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.21□□□□□ -0.13
CDH12P55289 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDH12P55289 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDH12P55289 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDH12P55289 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDH12P55289 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDH12P55289 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
CDH12P55289 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
CDH12P55289 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.21□□□□□ -0.13
CDH12P55289 CNN2P2-201ENST00000443536 909 ntBASIC14.21□□□□□ -0.13
CDH12P55289 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.21□□□□□ -0.13
CDH12P55289 CNN2P3-201ENST00000450201 906 ntBASIC14.21□□□□□ -0.13
CDH12P55289 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.21□□□□□ -0.13
CDH12P55289 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.21□□□□□ -0.13
CDH12P55289 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CDH12P55289 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.21□□□□□ -0.13
CDH12P55289 AL512361.1-201ENST00000554200 418 ntBASIC14.21□□□□□ -0.13
CDH12P55289 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.21□□□□□ -0.13
CDH12P55289 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.21□□□□□ -0.13
CDH12P55289 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CDH12P55289 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms