Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
PDX1P52945 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PDX1P52945 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PDX1P52945 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PDX1P52945 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PDX1P52945 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PDX1P52945 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
PDX1P52945 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.76□□□□□ -0.05
PDX1P52945 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.76□□□□□ -0.05
PDX1P52945 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PDX1P52945 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.76□□□□□ -0.05
PDX1P52945 RNA5SP423-201ENST00000517127 109 ntBASIC14.76□□□□□ -0.05
PDX1P52945 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.76□□□□□ -0.05
PDX1P52945 ACTG1P17-201ENST00000558391 1119 ntBASIC14.76□□□□□ -0.05
PDX1P52945 RN7SL48P-201ENST00000579283 293 ntBASIC14.76□□□□□ -0.05
PDX1P52945 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.76□□□□□ -0.05
PDX1P52945 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
PDX1P52945 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
PDX1P52945 AC025181.2-201ENST00000606994 802 ntBASIC14.76□□□□□ -0.05
PDX1P52945 AL021578.1-201ENST00000613646 709 ntBASIC14.76□□□□□ -0.05
PDX1P52945 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PDX1P52945 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PDX1P52945 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PDX1P52945 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
PDX1P52945 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.76□□□□□ -0.05
PDX1P52945 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
PDX1P52945 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PDX1P52945 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.76□□□□□ -0.05
PDX1P52945 AC015818.8-201ENST00000587907 1519 ntBASIC14.76□□□□□ -0.05
PDX1P52945 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.76□□□□□ -0.05
PDX1P52945 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.76□□□□□ -0.05
PDX1P52945 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.76□□□□□ -0.05
PDX1P52945 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.76□□□□□ -0.05
PDX1P52945 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
PDX1P52945 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PDX1P52945 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.75□□□□□ -0.05
PDX1P52945 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDX1P52945 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDX1P52945 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDX1P52945 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDX1P52945 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDX1P52945 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PDX1P52945 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PDX1P52945 TMBIM7P-203ENST00000641617 1718 ntBASIC14.75□□□□□ -0.05
PDX1P52945 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PDX1P52945 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.75□□□□□ -0.05
PDX1P52945 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.75□□□□□ -0.05
PDX1P52945 AL596257.1-201ENST00000641463 2694 ntBASIC14.75□□□□□ -0.05
PDX1P52945 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PDX1P52945 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDX1P52945 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
PDX1P52945 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDX1P52945 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDX1P52945 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDX1P52945 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDX1P52945 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDX1P52945 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDX1P52945 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDX1P52945 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDX1P52945 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.75□□□□□ -0.05
PDX1P52945 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.75□□□□□ -0.05
PDX1P52945 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.75□□□□□ -0.05
PDX1P52945 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
PDX1P52945 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.75□□□□□ -0.05
PDX1P52945 AC004898.1-201ENST00000451057 766 ntBASIC14.75□□□□□ -0.05
PDX1P52945 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.75□□□□□ -0.05
PDX1P52945 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
PDX1P52945 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC14.75□□□□□ -0.05
PDX1P52945 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
PDX1P52945 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.75□□□□□ -0.05
PDX1P52945 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.75□□□□□ -0.05
PDX1P52945 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.75□□□□□ -0.05
PDX1P52945 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
PDX1P52945 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
PDX1P52945 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDX1P52945 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDX1P52945 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.75□□□□□ -0.05
PDX1P52945 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDX1P52945 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDX1P52945 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
PDX1P52945 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.75□□□□□ -0.05
PDX1P52945 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDX1P52945 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
PDX1P52945 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.75□□□□□ -0.05
PDX1P52945 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDX1P52945 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDX1P52945 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PDX1P52945 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
PDX1P52945 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PDX1P52945 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
PDX1P52945 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.74□□□□□ -0.05
PDX1P52945 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.74□□□□□ -0.05
PDX1P52945 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.74□□□□□ -0.05
PDX1P52945 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
PDX1P52945 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDX1P52945 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
PDX1P52945 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PDX1P52945 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDX1P52945 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDX1P52945 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms