Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.4□□□□□ -0.1
CLK1P49759 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.4□□□□□ -0.1
CLK1P49759 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.4□□□□□ -0.1
CLK1P49759 AL450472.2-201ENST00000603663 1156 ntBASIC14.4□□□□□ -0.1
CLK1P49759 AL589739.1-201ENST00000607720 493 ntBASIC14.4□□□□□ -0.1
CLK1P49759 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.4□□□□□ -0.1
CLK1P49759 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.4□□□□□ -0.1
CLK1P49759 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.4□□□□□ -0.1
CLK1P49759 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CLK1P49759 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.4□□□□□ -0.1
CLK1P49759 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.4□□□□□ -0.1
CLK1P49759 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLK1P49759 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLK1P49759 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLK1P49759 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLK1P49759 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLK1P49759 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLK1P49759 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLK1P49759 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLK1P49759 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLK1P49759 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLK1P49759 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLK1P49759 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CLK1P49759 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLK1P49759 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLK1P49759 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.39□□□□□ -0.11
CLK1P49759 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLK1P49759 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLK1P49759 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC14.39□□□□□ -0.11
CLK1P49759 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLK1P49759 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.39□□□□□ -0.11
CLK1P49759 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CLK1P49759 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLK1P49759 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLK1P49759 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLK1P49759 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLK1P49759 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.39□□□□□ -0.11
CLK1P49759 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLK1P49759 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.39□□□□□ -0.11
CLK1P49759 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLK1P49759 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLK1P49759 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC14.39□□□□□ -0.11
CLK1P49759 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLK1P49759 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLK1P49759 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.39□□□□□ -0.11
CLK1P49759 AC107890.1-201ENST00000422478 521 ntBASIC14.39□□□□□ -0.11
CLK1P49759 METTL21AP1-201ENST00000438852 635 ntBASIC14.39□□□□□ -0.11
CLK1P49759 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLK1P49759 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.39□□□□□ -0.11
CLK1P49759 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.39□□□□□ -0.11
CLK1P49759 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.39□□□□□ -0.11
CLK1P49759 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.39□□□□□ -0.11
CLK1P49759 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLK1P49759 AC069120.2-201ENST00000524091 540 ntBASIC14.39□□□□□ -0.11
CLK1P49759 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.39□□□□□ -0.11
CLK1P49759 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.39□□□□□ -0.11
CLK1P49759 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.39□□□□□ -0.11
CLK1P49759 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.39□□□□□ -0.11
CLK1P49759 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.39□□□□□ -0.11
CLK1P49759 MIR6069-201ENST00000620069 79 ntBASIC14.39□□□□□ -0.11
CLK1P49759 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.39□□□□□ -0.11
CLK1P49759 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLK1P49759 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLK1P49759 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLK1P49759 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLK1P49759 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLK1P49759 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLK1P49759 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.39□□□□□ -0.11
CLK1P49759 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.39□□□□□ -0.11
CLK1P49759 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLK1P49759 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLK1P49759 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLK1P49759 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CLK1P49759 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLK1P49759 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.39□□□□□ -0.11
CLK1P49759 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLK1P49759 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.39□□□□□ -0.11
CLK1P49759 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLK1P49759 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLK1P49759 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.38□□□□□ -0.11
CLK1P49759 AC140479.7-201ENST00000636301 2332 ntBASIC14.38□□□□□ -0.11
CLK1P49759 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.38□□□□□ -0.11
CLK1P49759 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CLK1P49759 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.38□□□□□ -0.11
CLK1P49759 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLK1P49759 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLK1P49759 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLK1P49759 FO538757.1-201ENST00000623083 1397 ntBASIC14.38□□□□□ -0.11
CLK1P49759 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLK1P49759 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.38□□□□□ -0.11
CLK1P49759 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLK1P49759 AL645939.2-201ENST00000427340 991 ntBASIC14.38□□□□□ -0.11
CLK1P49759 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CLK1P49759 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.38□□□□□ -0.11
CLK1P49759 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.38□□□□□ -0.11
CLK1P49759 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.38□□□□□ -0.11
CLK1P49759 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.38□□□□□ -0.11
CLK1P49759 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.38□□□□□ -0.11
CLK1P49759 AC125807.1-201ENST00000483097 614 ntBASIC14.38□□□□□ -0.11
CLK1P49759 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms