Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GABRA4P48169 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GABRA4P48169 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GABRA4P48169 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GABRA4P48169 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GABRA4P48169 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.33□□□□□ -0.12
GABRA4P48169 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GABRA4P48169 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GABRA4P48169 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GABRA4P48169 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
GABRA4P48169 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
GABRA4P48169 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
GABRA4P48169 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
GABRA4P48169 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GABRA4P48169 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GABRA4P48169 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
GABRA4P48169 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
GABRA4P48169 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.32□□□□□ -0.12
GABRA4P48169 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GABRA4P48169 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.32□□□□□ -0.12
GABRA4P48169 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GABRA4P48169 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GABRA4P48169 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
GABRA4P48169 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
GABRA4P48169 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
GABRA4P48169 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GABRA4P48169 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
GABRA4P48169 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
GABRA4P48169 BRWD1P1-201ENST00000401091 371 ntBASIC14.32□□□□□ -0.12
GABRA4P48169 AL136309.1-201ENST00000403917 691 ntBASIC14.32□□□□□ -0.12
GABRA4P48169 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.32□□□□□ -0.12
GABRA4P48169 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GABRA4P48169 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.32□□□□□ -0.12
GABRA4P48169 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.32□□□□□ -0.12
GABRA4P48169 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.32□□□□□ -0.12
GABRA4P48169 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14.32□□□□□ -0.12
GABRA4P48169 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC14.32□□□□□ -0.12
GABRA4P48169 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC14.32□□□□□ -0.12
GABRA4P48169 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC14.32□□□□□ -0.12
GABRA4P48169 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC14.32□□□□□ -0.12
GABRA4P48169 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GABRA4P48169 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.32□□□□□ -0.12
GABRA4P48169 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
GABRA4P48169 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.32□□□□□ -0.12
GABRA4P48169 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
GABRA4P48169 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
GABRA4P48169 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GABRA4P48169 AC068587.6-202ENST00000641839 5619 ntBASIC14.32□□□□□ -0.12
GABRA4P48169 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
GABRA4P48169 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GABRA4P48169 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
GABRA4P48169 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
GABRA4P48169 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.31□□□□□ -0.12
GABRA4P48169 KRT8P4-201ENST00000509735 1454 ntBASIC14.31□□□□□ -0.12
GABRA4P48169 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.31□□□□□ -0.12
GABRA4P48169 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
GABRA4P48169 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.31□□□□□ -0.12
GABRA4P48169 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
GABRA4P48169 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
GABRA4P48169 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GABRA4P48169 AC011840.2-201ENST00000563063 1520 ntBASIC14.31□□□□□ -0.12
GABRA4P48169 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.31□□□□□ -0.12
GABRA4P48169 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.31□□□□□ -0.12
GABRA4P48169 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GABRA4P48169 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
GABRA4P48169 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GABRA4P48169 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.31□□□□□ -0.12
GABRA4P48169 AC092384.3-202ENST00000564646 2873 ntBASIC14.31□□□□□ -0.12
GABRA4P48169 AC091951.1-201ENST00000512854 2465 ntBASIC14.31□□□□□ -0.12
GABRA4P48169 AC009093.2-202ENST00000620513 2079 ntBASIC14.31□□□□□ -0.12
GABRA4P48169 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
GABRA4P48169 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GABRA4P48169 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GABRA4P48169 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GABRA4P48169 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.31□□□□□ -0.12
GABRA4P48169 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GABRA4P48169 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GABRA4P48169 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.31□□□□□ -0.12
GABRA4P48169 BTBD6P1-201ENST00000412176 1267 ntBASIC14.31□□□□□ -0.12
GABRA4P48169 HSPB1P2-201ENST00000448722 546 ntBASIC14.31□□□□□ -0.12
GABRA4P48169 HIST2H2BB-201ENST00000449108 381 ntBASIC14.31□□□□□ -0.12
GABRA4P48169 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.31□□□□□ -0.12
GABRA4P48169 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.31□□□□□ -0.12
GABRA4P48169 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC14.31□□□□□ -0.12
GABRA4P48169 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.31□□□□□ -0.12
GABRA4P48169 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.31□□□□□ -0.12
GABRA4P48169 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC14.31□□□□□ -0.12
GABRA4P48169 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC14.31□□□□□ -0.12
GABRA4P48169 RN7SL219P-201ENST00000582872 296 ntBASIC14.31□□□□□ -0.12
GABRA4P48169 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
GABRA4P48169 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC14.31□□□□□ -0.12
GABRA4P48169 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.31□□□□□ -0.12
GABRA4P48169 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GABRA4P48169 PRKN-211ENST00000615065 261 ntTSL 5 BASIC14.31□□□□□ -0.12
GABRA4P48169 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
GABRA4P48169 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GABRA4P48169 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GABRA4P48169 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GABRA4P48169 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GABRA4P48169 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms