Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CBX5P45973 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
CBX5P45973 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.19□□□□□ -0.3
CBX5P45973 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CBX5P45973 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CBX5P45973 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CBX5P45973 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC13.19□□□□□ -0.3
CBX5P45973 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CBX5P45973 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC13.19□□□□□ -0.3
CBX5P45973 GHSR-202ENST00000427970 912 ntBASIC13.19□□□□□ -0.3
CBX5P45973 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.19□□□□□ -0.3
CBX5P45973 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC13.19□□□□□ -0.3
CBX5P45973 SMN2-210ENST00000511812 867 ntTSL 2 BASIC13.19□□□□□ -0.3
CBX5P45973 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC13.19□□□□□ -0.3
CBX5P45973 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC13.19□□□□□ -0.3
CBX5P45973 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC13.19□□□□□ -0.3
CBX5P45973 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.19□□□□□ -0.3
CBX5P45973 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC13.19□□□□□ -0.3
CBX5P45973 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CBX5P45973 AL445228.2-201ENST00000605589 952 ntBASIC13.19□□□□□ -0.3
CBX5P45973 AC148477.8-201ENST00000624298 468 ntBASIC13.19□□□□□ -0.3
CBX5P45973 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC13.19□□□□□ -0.3
CBX5P45973 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CBX5P45973 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CBX5P45973 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.19□□□□□ -0.3
CBX5P45973 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CBX5P45973 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CBX5P45973 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CBX5P45973 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CBX5P45973 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CBX5P45973 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CBX5P45973 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.19□□□□□ -0.3
CBX5P45973 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.19□□□□□ -0.3
CBX5P45973 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CBX5P45973 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CBX5P45973 USP47-202ENST00000339865 7775 ntTSL 2 BASIC13.19□□□□□ -0.3
CBX5P45973 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CBX5P45973 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CBX5P45973 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CBX5P45973 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CBX5P45973 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CBX5P45973 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
CBX5P45973 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CBX5P45973 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CBX5P45973 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.18□□□□□ -0.3
CBX5P45973 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.18□□□□□ -0.3
CBX5P45973 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CBX5P45973 AP001972.5-201ENST00000624624 2338 ntBASIC13.18□□□□□ -0.3
CBX5P45973 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CBX5P45973 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CBX5P45973 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CBX5P45973 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CBX5P45973 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.18□□□□□ -0.3
CBX5P45973 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CBX5P45973 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CBX5P45973 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CBX5P45973 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.18□□□□□ -0.3
CBX5P45973 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.18□□□□□ -0.3
CBX5P45973 MBLAC2-202ENST00000514906 1936 ntBASIC13.18□□□□□ -0.3
CBX5P45973 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CBX5P45973 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
CBX5P45973 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.18□□□□□ -0.3
CBX5P45973 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.18□□□□□ -0.3
CBX5P45973 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC13.18□□□□□ -0.3
CBX5P45973 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC13.18□□□□□ -0.3
CBX5P45973 RNA5SP415-201ENST00000517246 115 ntBASIC13.18□□□□□ -0.3
CBX5P45973 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.18□□□□□ -0.3
CBX5P45973 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.18□□□□□ -0.3
CBX5P45973 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CBX5P45973 FTO-214ENST00000636218 2227 ntTSL 5 BASIC13.18□□□□□ -0.3
CBX5P45973 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CBX5P45973 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CBX5P45973 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
CBX5P45973 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CBX5P45973 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.18□□□□□ -0.3
CBX5P45973 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CBX5P45973 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CBX5P45973 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CBX5P45973 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CBX5P45973 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
CBX5P45973 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CBX5P45973 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CBX5P45973 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC13.18□□□□□ -0.3
CBX5P45973 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
CBX5P45973 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC13.18□□□□□ -0.3
CBX5P45973 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC13.18□□□□□ -0.3
CBX5P45973 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC13.18□□□□□ -0.3
CBX5P45973 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CBX5P45973 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CBX5P45973 FANCC-210ENST00000490972 2709 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CBX5P45973 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CBX5P45973 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
CBX5P45973 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CBX5P45973 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CBX5P45973 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CBX5P45973 CSPG4P11-201ENST00000560634 4910 ntBASIC13.17□□□□□ -0.3
CBX5P45973 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CBX5P45973 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CBX5P45973 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CBX5P45973 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms