Protein–RNA interactions for Protein: P42771

CDKN2A, Cyclin-dependent kinase inhibitor 2A, humanhuman

Known RBP Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2AP42771 AL662799.1-202ENST00000614205 422 ntBASIC13.58□□□□□ -0.24
CDKN2AP42771 AC093512.1-201ENST00000617969 520 ntBASIC13.58□□□□□ -0.24
CDKN2AP42771 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDKN2AP42771 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDKN2AP42771 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.58□□□□□ -0.24
CDKN2AP42771 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDKN2AP42771 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CDKN2AP42771 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDKN2AP42771 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDKN2AP42771 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDKN2AP42771 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.58□□□□□ -0.24
CDKN2AP42771 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.58□□□□□ -0.24
CDKN2AP42771 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.58□□□□□ -0.24
CDKN2AP42771 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDKN2AP42771 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDKN2AP42771 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CDKN2AP42771 LINC01230-201ENST00000625222 3017 ntBASIC13.58□□□□□ -0.24
CDKN2AP42771 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.58□□□□□ -0.24
CDKN2AP42771 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDKN2AP42771 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDKN2AP42771 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDKN2AP42771 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN2AP42771 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN2AP42771 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN2AP42771 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN2AP42771 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN2AP42771 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN2AP42771 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CDKN2AP42771 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN2AP42771 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
CDKN2AP42771 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN2AP42771 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN2AP42771 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN2AP42771 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN2AP42771 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN2AP42771 MRPS18AP1-201ENST00000414458 589 ntBASIC13.57□□□□□ -0.24
CDKN2AP42771 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC13.57□□□□□ -0.24
CDKN2AP42771 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.57□□□□□ -0.24
CDKN2AP42771 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.57□□□□□ -0.24
CDKN2AP42771 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN2AP42771 AC023310.3-201ENST00000557027 670 ntBASIC13.57□□□□□ -0.24
CDKN2AP42771 AC100756.1-201ENST00000562736 682 ntBASIC13.57□□□□□ -0.24
CDKN2AP42771 AC138749.3-201ENST00000567691 622 ntBASIC13.57□□□□□ -0.24
CDKN2AP42771 AC036164.1-201ENST00000570544 333 ntBASIC13.57□□□□□ -0.24
CDKN2AP42771 AL049840.4-201ENST00000602422 811 ntBASIC13.57□□□□□ -0.24
CDKN2AP42771 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC13.57□□□□□ -0.24
CDKN2AP42771 AC116165.1-201ENST00000611806 668 ntBASIC13.57□□□□□ -0.24
CDKN2AP42771 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.57□□□□□ -0.24
CDKN2AP42771 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
CDKN2AP42771 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN2AP42771 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN2AP42771 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.57□□□□□ -0.24
CDKN2AP42771 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.57□□□□□ -0.24
CDKN2AP42771 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN2AP42771 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN2AP42771 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
CDKN2AP42771 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
CDKN2AP42771 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN2AP42771 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN2AP42771 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN2AP42771 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN2AP42771 AC023090.2-201ENST00000625182 2110 ntBASIC13.57□□□□□ -0.24
CDKN2AP42771 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.57□□□□□ -0.24
CDKN2AP42771 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN2AP42771 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN2AP42771 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDKN2AP42771 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
CDKN2AP42771 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDKN2AP42771 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CDKN2AP42771 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDKN2AP42771 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDKN2AP42771 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDKN2AP42771 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDKN2AP42771 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDKN2AP42771 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.56□□□□□ -0.24
CDKN2AP42771 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDKN2AP42771 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.56□□□□□ -0.24
CDKN2AP42771 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.56□□□□□ -0.24
CDKN2AP42771 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.56□□□□□ -0.24
CDKN2AP42771 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.56□□□□□ -0.24
CDKN2AP42771 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDKN2AP42771 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.56□□□□□ -0.24
CDKN2AP42771 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.56□□□□□ -0.24
CDKN2AP42771 AL512638.1-201ENST00000457493 794 ntBASIC13.56□□□□□ -0.24
CDKN2AP42771 VDAC1P7-201ENST00000462417 847 ntBASIC13.56□□□□□ -0.24
CDKN2AP42771 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CDKN2AP42771 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.56□□□□□ -0.24
CDKN2AP42771 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.56□□□□□ -0.24
CDKN2AP42771 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDKN2AP42771 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.56□□□□□ -0.24
CDKN2AP42771 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.56□□□□□ -0.24
CDKN2AP42771 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.56□□□□□ -0.24
CDKN2AP42771 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.56□□□□□ -0.24
CDKN2AP42771 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.56□□□□□ -0.24
CDKN2AP42771 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.56□□□□□ -0.24
CDKN2AP42771 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.56□□□□□ -0.24
CDKN2AP42771 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CDKN2AP42771 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDKN2AP42771 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDKN2AP42771 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms