Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMGCLP35914 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
HMGCLP35914 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.09■□□□□ 0.01
HMGCLP35914 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.09■□□□□ 0.01
HMGCLP35914 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HMGCLP35914 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMGCLP35914 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.09■□□□□ 0.01
HMGCLP35914 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.09■□□□□ 0.01
HMGCLP35914 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.09■□□□□ 0.01
HMGCLP35914 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.09■□□□□ 0.01
HMGCLP35914 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMGCLP35914 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMGCLP35914 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMGCLP35914 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.09■□□□□ 0.01
HMGCLP35914 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HMGCLP35914 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMGCLP35914 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMGCLP35914 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMGCLP35914 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.09■□□□□ 0.01
HMGCLP35914 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMGCLP35914 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMGCLP35914 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMGCLP35914 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMGCLP35914 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMGCLP35914 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HMGCLP35914 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
HMGCLP35914 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
HMGCLP35914 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.08■□□□□ 0.01
HMGCLP35914 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
HMGCLP35914 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
HMGCLP35914 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
HMGCLP35914 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.08■□□□□ 0
HMGCLP35914 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HMGCLP35914 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.08■□□□□ 0
HMGCLP35914 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
HMGCLP35914 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HMGCLP35914 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HMGCLP35914 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.08■□□□□ 0
HMGCLP35914 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.08■□□□□ 0
HMGCLP35914 KRT43P-201ENST00000434019 910 ntBASIC15.08■□□□□ 0
HMGCLP35914 AC245100.3-201ENST00000441281 285 ntBASIC15.08■□□□□ 0
HMGCLP35914 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.08■□□□□ 0
HMGCLP35914 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
HMGCLP35914 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.08■□□□□ 0
HMGCLP35914 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.08■□□□□ 0
HMGCLP35914 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
HMGCLP35914 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.08■□□□□ 0
HMGCLP35914 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.08■□□□□ 0
HMGCLP35914 ENPP7P14-201ENST00000621765 1040 ntBASIC15.08■□□□□ 0
HMGCLP35914 AL035252.4-201ENST00000624174 288 ntBASIC15.08■□□□□ 0
HMGCLP35914 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HMGCLP35914 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.08■□□□□ 0
HMGCLP35914 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.08■□□□□ 0
HMGCLP35914 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.08■□□□□ 0
HMGCLP35914 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.08■□□□□ 0
HMGCLP35914 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.08■□□□□ 0
HMGCLP35914 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
HMGCLP35914 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HMGCLP35914 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HMGCLP35914 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.08■□□□□ 0
HMGCLP35914 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.08■□□□□ 0
HMGCLP35914 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
HMGCLP35914 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HMGCLP35914 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HMGCLP35914 CICP23-201ENST00000605013 2741 ntBASIC15.08■□□□□ 0
HMGCLP35914 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
HMGCLP35914 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
HMGCLP35914 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
HMGCLP35914 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.07■□□□□ 0
HMGCLP35914 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.07■□□□□ 0
HMGCLP35914 AC018442.1-201ENST00000421439 2061 ntBASIC15.07■□□□□ 0
HMGCLP35914 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
HMGCLP35914 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.07■□□□□ 0
HMGCLP35914 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
HMGCLP35914 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HMGCLP35914 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
HMGCLP35914 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.07■□□□□ 0
HMGCLP35914 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.07■□□□□ 0
HMGCLP35914 C2orf27AP3-201ENST00000434123 579 ntBASIC15.07■□□□□ 0
HMGCLP35914 AC016694.1-201ENST00000434179 700 ntBASIC15.07■□□□□ 0
HMGCLP35914 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.07■□□□□ 0
HMGCLP35914 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.07■□□□□ 0
HMGCLP35914 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.07■□□□□ 0
HMGCLP35914 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.07■□□□□ 0
HMGCLP35914 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.07■□□□□ 0
HMGCLP35914 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.07■□□□□ 0
HMGCLP35914 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
HMGCLP35914 AL354718.3-201ENST00000616414 581 ntBASIC15.07■□□□□ 0
HMGCLP35914 AL162274.1-201ENST00000617191 1098 ntBASIC15.07■□□□□ 0
HMGCLP35914 CR382287.1-201ENST00000623954 586 ntBASIC15.07■□□□□ 0
HMGCLP35914 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.07■□□□□ 0
HMGCLP35914 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
HMGCLP35914 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HMGCLP35914 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
HMGCLP35914 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.07■□□□□ 0
HMGCLP35914 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.07■□□□□ 0
HMGCLP35914 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.07■□□□□ 0
HMGCLP35914 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.07■□□□□ 0
HMGCLP35914 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
HMGCLP35914 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms