Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC13.54□□□□□ -0.24
CD40LGP29965 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD40LGP29965 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
CD40LGP29965 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CD40LGP29965 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD40LGP29965 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.54□□□□□ -0.24
CD40LGP29965 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.54□□□□□ -0.24
CD40LGP29965 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD40LGP29965 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD40LGP29965 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CD40LGP29965 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.54□□□□□ -0.24
CD40LGP29965 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.54□□□□□ -0.24
CD40LGP29965 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD40LGP29965 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.54□□□□□ -0.24
CD40LGP29965 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.54□□□□□ -0.24
CD40LGP29965 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC13.54□□□□□ -0.24
CD40LGP29965 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CD40LGP29965 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CD40LGP29965 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD40LGP29965 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD40LGP29965 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CD40LGP29965 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD40LGP29965 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CD40LGP29965 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
CD40LGP29965 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.53□□□□□ -0.24
CD40LGP29965 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD40LGP29965 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CD40LGP29965 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CD40LGP29965 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD40LGP29965 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CD40LGP29965 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CD40LGP29965 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD40LGP29965 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD40LGP29965 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD40LGP29965 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD40LGP29965 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD40LGP29965 AKR1C7P-201ENST00000305623 895 ntBASIC13.53□□□□□ -0.24
CD40LGP29965 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CD40LGP29965 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD40LGP29965 MED22-202ENST00000371999 987 ntTSL 3 BASIC13.53□□□□□ -0.24
CD40LGP29965 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD40LGP29965 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC13.53□□□□□ -0.24
CD40LGP29965 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
CD40LGP29965 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC13.53□□□□□ -0.24
CD40LGP29965 KRT18P67-201ENST00000432816 1264 ntBASIC13.53□□□□□ -0.24
CD40LGP29965 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC13.53□□□□□ -0.24
CD40LGP29965 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC13.53□□□□□ -0.24
CD40LGP29965 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC13.53□□□□□ -0.24
CD40LGP29965 HS6ST1P1-201ENST00000481504 1234 ntBASIC13.53□□□□□ -0.24
CD40LGP29965 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC13.53□□□□□ -0.24
CD40LGP29965 RNPS1P1-201ENST00000507437 918 ntBASIC13.53□□□□□ -0.24
CD40LGP29965 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.53□□□□□ -0.24
CD40LGP29965 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC13.53□□□□□ -0.24
CD40LGP29965 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC13.53□□□□□ -0.24
CD40LGP29965 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CD40LGP29965 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC13.53□□□□□ -0.24
CD40LGP29965 RNF151-202ENST00000569210 853 ntTSL 2 BASIC13.53□□□□□ -0.24
CD40LGP29965 MIR3909-201ENST00000579518 119 ntBASIC13.53□□□□□ -0.24
CD40LGP29965 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC13.53□□□□□ -0.24
CD40LGP29965 CALM3-211ENST00000598871 561 ntTSL 4 BASIC13.53□□□□□ -0.24
CD40LGP29965 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC13.53□□□□□ -0.24
CD40LGP29965 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CD40LGP29965 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
CD40LGP29965 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CD40LGP29965 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.53□□□□□ -0.24
CD40LGP29965 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC13.53□□□□□ -0.24
CD40LGP29965 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CD40LGP29965 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.53□□□□□ -0.24
CD40LGP29965 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.53□□□□□ -0.24
CD40LGP29965 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC13.53□□□□□ -0.24
CD40LGP29965 TCAM1P-207ENST00000485295 1537 ntBASIC13.53□□□□□ -0.24
CD40LGP29965 AC012569.1-201ENST00000591191 1524 ntBASIC13.53□□□□□ -0.24
CD40LGP29965 AL589702.1-201ENST00000641229 1509 ntBASIC13.53□□□□□ -0.24
CD40LGP29965 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC13.53□□□□□ -0.24
CD40LGP29965 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC13.53□□□□□ -0.24
CD40LGP29965 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.53□□□□□ -0.24
CD40LGP29965 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD40LGP29965 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD40LGP29965 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD40LGP29965 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CD40LGP29965 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CD40LGP29965 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
CD40LGP29965 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
CD40LGP29965 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CD40LGP29965 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
CD40LGP29965 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
CD40LGP29965 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.24
CD40LGP29965 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.52□□□□□ -0.24
CD40LGP29965 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC13.52□□□□□ -0.24
CD40LGP29965 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CD40LGP29965 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
CD40LGP29965 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
CD40LGP29965 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.52□□□□□ -0.24
CD40LGP29965 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CD40LGP29965 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CD40LGP29965 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CD40LGP29965 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
CD40LGP29965 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD40LGP29965 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD40LGP29965 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms