Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.01□□□□□ -0.17
ABCD3P28288 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.01□□□□□ -0.17
ABCD3P28288 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.01□□□□□ -0.17
ABCD3P28288 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.01□□□□□ -0.17
ABCD3P28288 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ABCD3P28288 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ABCD3P28288 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ABCD3P28288 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
ABCD3P28288 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ABCD3P28288 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ABCD3P28288 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ABCD3P28288 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ABCD3P28288 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
ABCD3P28288 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ABCD3P28288 LILRP1-201ENST00000444199 1370 ntBASIC14.01□□□□□ -0.17
ABCD3P28288 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
ABCD3P28288 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ABCD3P28288 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
ABCD3P28288 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
ABCD3P28288 AC092933.1-201ENST00000393644 945 ntBASIC14.01□□□□□ -0.17
ABCD3P28288 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ABCD3P28288 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
ABCD3P28288 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.01□□□□□ -0.17
ABCD3P28288 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.01□□□□□ -0.17
ABCD3P28288 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.01□□□□□ -0.17
ABCD3P28288 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.01□□□□□ -0.17
ABCD3P28288 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
ABCD3P28288 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ABCD3P28288 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ABCD3P28288 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ABCD3P28288 AL603764.1-201ENST00000636452 321 ntBASIC14.01□□□□□ -0.17
ABCD3P28288 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
ABCD3P28288 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ABCD3P28288 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ABCD3P28288 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
ABCD3P28288 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ABCD3P28288 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ABCD3P28288 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ABCD3P28288 AP002414.2-201ENST00000591780 3365 ntBASIC14.01□□□□□ -0.17
ABCD3P28288 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ABCD3P28288 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ABCD3P28288 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.01□□□□□ -0.17
ABCD3P28288 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ABCD3P28288 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.01□□□□□ -0.17
ABCD3P28288 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ABCD3P28288 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ABCD3P28288 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ABCD3P28288 AC007326.2-201ENST00000624224 7579 ntBASIC14.01□□□□□ -0.17
ABCD3P28288 FAM45BP-202ENST00000592932 1624 ntBASIC14.01□□□□□ -0.17
ABCD3P28288 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ABCD3P28288 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ABCD3P28288 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ABCD3P28288 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14□□□□□ -0.17
ABCD3P28288 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
ABCD3P28288 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
ABCD3P28288 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
ABCD3P28288 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ABCD3P28288 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
ABCD3P28288 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14□□□□□ -0.17
ABCD3P28288 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14□□□□□ -0.17
ABCD3P28288 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
ABCD3P28288 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ABCD3P28288 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14□□□□□ -0.17
ABCD3P28288 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14□□□□□ -0.17
ABCD3P28288 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
ABCD3P28288 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ABCD3P28288 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ABCD3P28288 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
ABCD3P28288 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
ABCD3P28288 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14□□□□□ -0.17
ABCD3P28288 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14□□□□□ -0.17
ABCD3P28288 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
ABCD3P28288 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
ABCD3P28288 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ABCD3P28288 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ABCD3P28288 PGF-202ENST00000405431 666 ntTSL 5 BASIC14□□□□□ -0.17
ABCD3P28288 HIST1H2BPS3-201ENST00000419683 341 ntBASIC14□□□□□ -0.17
ABCD3P28288 EIF3FP3-201ENST00000434851 1086 ntBASIC14□□□□□ -0.17
ABCD3P28288 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14□□□□□ -0.17
ABCD3P28288 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ABCD3P28288 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14□□□□□ -0.17
ABCD3P28288 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14□□□□□ -0.17
ABCD3P28288 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14□□□□□ -0.17
ABCD3P28288 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14□□□□□ -0.17
ABCD3P28288 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14□□□□□ -0.17
ABCD3P28288 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14□□□□□ -0.17
ABCD3P28288 KRT17P8-201ENST00000540749 863 ntBASIC14□□□□□ -0.17
ABCD3P28288 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14□□□□□ -0.17
ABCD3P28288 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14□□□□□ -0.17
ABCD3P28288 DUX4L47-201ENST00000566374 394 ntBASIC14□□□□□ -0.17
ABCD3P28288 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14□□□□□ -0.17
ABCD3P28288 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14□□□□□ -0.17
ABCD3P28288 GNRHR2-203ENST00000581100 1187 ntBASIC14□□□□□ -0.17
ABCD3P28288 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ABCD3P28288 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
ABCD3P28288 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14□□□□□ -0.17
ABCD3P28288 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14□□□□□ -0.17
ABCD3P28288 AC055811.4-201ENST00000624039 1754 ntBASIC14□□□□□ -0.17
ABCD3P28288 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ABCD3P28288 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms