Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AC004066.1-201ENST00000502488 802 ntBASIC16.57■□□□□ 0.24
RFX1P22670 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.57■□□□□ 0.24
RFX1P22670 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RFX1P22670 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.57■□□□□ 0.24
RFX1P22670 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC16.57■□□□□ 0.24
RFX1P22670 AC233724.13-201ENST00000598383 410 ntBASIC16.57■□□□□ 0.24
RFX1P22670 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RFX1P22670 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFX1P22670 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
RFX1P22670 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFX1P22670 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.57■□□□□ 0.24
RFX1P22670 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFX1P22670 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.57■□□□□ 0.24
RFX1P22670 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RFX1P22670 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFX1P22670 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RFX1P22670 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFX1P22670 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFX1P22670 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
RFX1P22670 AC007787.1-201ENST00000588095 1583 ntBASIC16.56■□□□□ 0.24
RFX1P22670 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RFX1P22670 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
RFX1P22670 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RFX1P22670 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFX1P22670 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.56■□□□□ 0.24
RFX1P22670 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RFX1P22670 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFX1P22670 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFX1P22670 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RFX1P22670 SERPINA7P1-201ENST00000443077 631 ntBASIC16.56■□□□□ 0.24
RFX1P22670 AL355994.2-201ENST00000447882 704 ntBASIC16.56■□□□□ 0.24
RFX1P22670 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RFX1P22670 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.56■□□□□ 0.24
RFX1P22670 AGER-214ENST00000538695 487 ntTSL 2 BASIC16.56■□□□□ 0.24
RFX1P22670 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
RFX1P22670 AC036164.1-201ENST00000570544 333 ntBASIC16.56■□□□□ 0.24
RFX1P22670 AC103810.3-201ENST00000583567 96 ntBASIC16.56■□□□□ 0.24
RFX1P22670 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RFX1P22670 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFX1P22670 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFX1P22670 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RFX1P22670 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.56■□□□□ 0.24
RFX1P22670 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFX1P22670 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFX1P22670 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.56■□□□□ 0.24
RFX1P22670 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.56■□□□□ 0.24
RFX1P22670 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFX1P22670 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFX1P22670 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RFX1P22670 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.56■□□□□ 0.24
RFX1P22670 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.56■□□□□ 0.24
RFX1P22670 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.55■□□□□ 0.24
RFX1P22670 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RFX1P22670 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC16.55■□□□□ 0.24
RFX1P22670 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFX1P22670 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFX1P22670 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFX1P22670 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFX1P22670 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFX1P22670 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFX1P22670 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFX1P22670 ANKRD19P-201ENST00000338192 862 ntBASIC16.55■□□□□ 0.24
RFX1P22670 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFX1P22670 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RFX1P22670 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.55■□□□□ 0.24
RFX1P22670 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.55■□□□□ 0.24
RFX1P22670 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.55■□□□□ 0.24
RFX1P22670 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC16.55■□□□□ 0.24
RFX1P22670 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.55■□□□□ 0.24
RFX1P22670 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.55■□□□□ 0.24
RFX1P22670 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC16.55■□□□□ 0.24
RFX1P22670 AC099548.2-209ENST00000480264 625 ntBASIC16.55■□□□□ 0.24
RFX1P22670 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RFX1P22670 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.55■□□□□ 0.24
RFX1P22670 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.55■□□□□ 0.24
RFX1P22670 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC16.55■□□□□ 0.24
RFX1P22670 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RFX1P22670 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.55■□□□□ 0.24
RFX1P22670 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
RFX1P22670 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.55■□□□□ 0.24
RFX1P22670 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC16.55■□□□□ 0.24
RFX1P22670 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.55■□□□□ 0.24
RFX1P22670 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RFX1P22670 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.55■□□□□ 0.24
RFX1P22670 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RFX1P22670 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.55■□□□□ 0.24
RFX1P22670 AL022328.1-201ENST00000610050 478 ntBASIC16.55■□□□□ 0.24
RFX1P22670 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.55■□□□□ 0.24
RFX1P22670 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.55■□□□□ 0.24
RFX1P22670 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RFX1P22670 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFX1P22670 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFX1P22670 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.55■□□□□ 0.24
RFX1P22670 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.55■□□□□ 0.24
RFX1P22670 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.55■□□□□ 0.24
RFX1P22670 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
RFX1P22670 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFX1P22670 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFX1P22670 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RFX1P22670 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms