Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SYN1P17600 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SYN1P17600 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SYN1P17600 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SYN1P17600 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SYN1P17600 TSPY25P-201ENST00000429463 745 ntBASIC16.27■□□□□ 0.2
SYN1P17600 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC16.27■□□□□ 0.2
SYN1P17600 SKA2-202ENST00000437036 625 ntTSL 2 BASIC16.27■□□□□ 0.2
SYN1P17600 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC16.27■□□□□ 0.2
SYN1P17600 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC16.27■□□□□ 0.2
SYN1P17600 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SYN1P17600 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC16.27■□□□□ 0.2
SYN1P17600 AC006122.1-201ENST00000493323 440 ntBASIC16.27■□□□□ 0.2
SYN1P17600 PGAM1P12-201ENST00000505622 748 ntBASIC16.27■□□□□ 0.2
SYN1P17600 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC16.27■□□□□ 0.2
SYN1P17600 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SYN1P17600 AP000911.2-201ENST00000534330 502 ntBASIC16.27■□□□□ 0.2
SYN1P17600 HMGB1P24-201ENST00000611897 328 ntBASIC16.27■□□□□ 0.2
SYN1P17600 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.2
SYN1P17600 AC011471.3-201ENST00000623576 402 ntBASIC16.27■□□□□ 0.2
SYN1P17600 DDX5-235ENST00000630471 473 ntTSL 4 BASIC16.27■□□□□ 0.2
SYN1P17600 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SYN1P17600 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SYN1P17600 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
SYN1P17600 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
SYN1P17600 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
SYN1P17600 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
SYN1P17600 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SYN1P17600 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SYN1P17600 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SYN1P17600 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.27■□□□□ 0.19
SYN1P17600 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SYN1P17600 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SYN1P17600 AC144522.1-201ENST00000625111 1658 ntBASIC16.27■□□□□ 0.19
SYN1P17600 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
SYN1P17600 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SYN1P17600 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SYN1P17600 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.26■□□□□ 0.19
SYN1P17600 FAM90A21P-201ENST00000510875 1396 ntBASIC16.26■□□□□ 0.19
SYN1P17600 FAM90A15P-201ENST00000514465 1395 ntBASIC16.26■□□□□ 0.19
SYN1P17600 FAM90A6P-201ENST00000515148 1394 ntBASIC16.26■□□□□ 0.19
SYN1P17600 FAM90A16P-201ENST00000526662 1395 ntBASIC16.26■□□□□ 0.19
SYN1P17600 FAM90A9P-201ENST00000527940 1395 ntBASIC16.26■□□□□ 0.19
SYN1P17600 FAM90A5P-201ENST00000528738 1395 ntBASIC16.26■□□□□ 0.19
SYN1P17600 FAM90A14P-201ENST00000530386 1395 ntBASIC16.26■□□□□ 0.19
SYN1P17600 FAM90A13P-201ENST00000534703 1395 ntBASIC16.26■□□□□ 0.19
SYN1P17600 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.26■□□□□ 0.19
SYN1P17600 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
SYN1P17600 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.26■□□□□ 0.19
SYN1P17600 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
SYN1P17600 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SYN1P17600 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
SYN1P17600 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SYN1P17600 RN7SKP230-201ENST00000365642 335 ntBASIC16.26■□□□□ 0.19
SYN1P17600 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC16.26■□□□□ 0.19
SYN1P17600 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SYN1P17600 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SYN1P17600 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SYN1P17600 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC16.26■□□□□ 0.19
SYN1P17600 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC16.26■□□□□ 0.19
SYN1P17600 AQP7P5-201ENST00000428759 1049 ntBASIC16.26■□□□□ 0.19
SYN1P17600 AQP7P4-201ENST00000447083 1042 ntBASIC16.26■□□□□ 0.19
SYN1P17600 AQP7P2-201ENST00000453967 1041 ntBASIC16.26■□□□□ 0.19
SYN1P17600 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SYN1P17600 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC16.26■□□□□ 0.19
SYN1P17600 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SYN1P17600 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC16.26■□□□□ 0.19
SYN1P17600 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
SYN1P17600 AC027237.1-201ENST00000560942 655 ntBASIC16.26■□□□□ 0.19
SYN1P17600 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC16.26■□□□□ 0.19
SYN1P17600 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC16.26■□□□□ 0.19
SYN1P17600 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC16.26■□□□□ 0.19
SYN1P17600 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC16.26■□□□□ 0.19
SYN1P17600 PEBP1P2-201ENST00000603980 558 ntBASIC16.26■□□□□ 0.19
SYN1P17600 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC16.26■□□□□ 0.19
SYN1P17600 AQP7P3-201ENST00000624547 1041 ntBASIC16.26■□□□□ 0.19
SYN1P17600 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
SYN1P17600 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
SYN1P17600 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
SYN1P17600 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
SYN1P17600 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
SYN1P17600 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
SYN1P17600 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
SYN1P17600 AL645728.2-202ENST00000641679 227 ntBASIC16.26■□□□□ 0.19
SYN1P17600 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SYN1P17600 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SYN1P17600 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.26■□□□□ 0.19
SYN1P17600 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SYN1P17600 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
SYN1P17600 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.26■□□□□ 0.19
SYN1P17600 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SYN1P17600 CYP4F23P-201ENST00000593402 1579 ntBASIC16.26■□□□□ 0.19
SYN1P17600 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SYN1P17600 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SYN1P17600 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SYN1P17600 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SYN1P17600 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
SYN1P17600 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.25■□□□□ 0.19
SYN1P17600 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.25■□□□□ 0.19
SYN1P17600 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms