Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
CCL4P13236 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.21□□□□□ -0.13
CCL4P13236 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL4P13236 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL4P13236 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.21□□□□□ -0.13
CCL4P13236 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CCL4P13236 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL4P13236 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL4P13236 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCL4P13236 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC14.21□□□□□ -0.13
CCL4P13236 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL4P13236 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.21□□□□□ -0.13
CCL4P13236 PUDPP3-201ENST00000445368 636 ntBASIC14.21□□□□□ -0.13
CCL4P13236 KLF2P1-201ENST00000447438 1042 ntBASIC14.21□□□□□ -0.13
CCL4P13236 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC14.21□□□□□ -0.13
CCL4P13236 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.21□□□□□ -0.13
CCL4P13236 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC14.21□□□□□ -0.13
CCL4P13236 AL160314.3-201ENST00000556041 767 ntBASIC14.21□□□□□ -0.13
CCL4P13236 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.21□□□□□ -0.13
CCL4P13236 AL161670.2-201ENST00000557650 1227 ntBASIC14.21□□□□□ -0.13
CCL4P13236 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC14.21□□□□□ -0.13
CCL4P13236 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC14.21□□□□□ -0.13
CCL4P13236 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
CCL4P13236 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCL4P13236 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
CCL4P13236 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL4P13236 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CCL4P13236 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CCL4P13236 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.21□□□□□ -0.13
CCL4P13236 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.21□□□□□ -0.13
CCL4P13236 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL4P13236 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
CCL4P13236 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CCL4P13236 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CCL4P13236 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CCL4P13236 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
CCL4P13236 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCL4P13236 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCL4P13236 AL138725.1-201ENST00000407347 1314 ntBASIC14.2□□□□□ -0.14
CCL4P13236 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CCL4P13236 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCL4P13236 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC14.2□□□□□ -0.14
CCL4P13236 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CCL4P13236 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCL4P13236 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
CCL4P13236 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCL4P13236 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCL4P13236 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCL4P13236 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCL4P13236 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CCL4P13236 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CCL4P13236 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC14.2□□□□□ -0.14
CCL4P13236 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC14.2□□□□□ -0.14
CCL4P13236 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCL4P13236 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC14.2□□□□□ -0.14
CCL4P13236 EEF1DP6-201ENST00000449232 372 ntBASIC14.2□□□□□ -0.14
CCL4P13236 MPRIPP1-201ENST00000452433 1089 ntBASIC14.2□□□□□ -0.14
CCL4P13236 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC14.2□□□□□ -0.14
CCL4P13236 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC14.2□□□□□ -0.14
CCL4P13236 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC14.2□□□□□ -0.14
CCL4P13236 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC14.2□□□□□ -0.14
CCL4P13236 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC14.2□□□□□ -0.14
CCL4P13236 SNORD3B-2-202ENST00000571722 791 ntBASIC14.2□□□□□ -0.14
CCL4P13236 MIR4722-201ENST00000578292 60 ntBASIC14.2□□□□□ -0.14
CCL4P13236 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCL4P13236 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CCL4P13236 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC14.2□□□□□ -0.14
CCL4P13236 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC14.2□□□□□ -0.14
CCL4P13236 AL136295.7-201ENST00000619226 1200 ntBASIC14.2□□□□□ -0.14
CCL4P13236 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCL4P13236 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCL4P13236 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCL4P13236 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CCL4P13236 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.2□□□□□ -0.14
CCL4P13236 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.2□□□□□ -0.14
CCL4P13236 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCL4P13236 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCL4P13236 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCL4P13236 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCL4P13236 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.2□□□□□ -0.14
CCL4P13236 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCL4P13236 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCL4P13236 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.2□□□□□ -0.14
CCL4P13236 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.2□□□□□ -0.14
CCL4P13236 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCL4P13236 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.2□□□□□ -0.14
CCL4P13236 AC008894.3-201ENST00000624324 3103 ntBASIC14.19□□□□□ -0.14
CCL4P13236 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CCL4P13236 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.19□□□□□ -0.14
CCL4P13236 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCL4P13236 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCL4P13236 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCL4P13236 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCL4P13236 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.19□□□□□ -0.14
CCL4P13236 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCL4P13236 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCL4P13236 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.19□□□□□ -0.14
CCL4P13236 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
CCL4P13236 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.19□□□□□ -0.14
CCL4P13236 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms