Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CD74P04233 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CD74P04233 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
CD74P04233 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CD74P04233 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CD74P04233 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CD74P04233 ADH5P3-201ENST00000433842 1137 ntBASIC12.8□□□□□ -0.36
CD74P04233 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC12.8□□□□□ -0.36
CD74P04233 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC12.8□□□□□ -0.36
CD74P04233 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC12.8□□□□□ -0.36
CD74P04233 PP7080-204ENST00000510714 601 ntTSL 3 BASIC12.8□□□□□ -0.36
CD74P04233 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC12.8□□□□□ -0.36
CD74P04233 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC12.8□□□□□ -0.36
CD74P04233 BANF1P1-201ENST00000553684 263 ntBASIC12.8□□□□□ -0.36
CD74P04233 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC12.8□□□□□ -0.36
CD74P04233 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC12.8□□□□□ -0.36
CD74P04233 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC12.8□□□□□ -0.36
CD74P04233 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC12.8□□□□□ -0.36
CD74P04233 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC12.8□□□□□ -0.36
CD74P04233 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CD74P04233 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
CD74P04233 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
CD74P04233 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CD74P04233 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CD74P04233 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.8□□□□□ -0.36
CD74P04233 AL360270.3-201ENST00000609118 1348 ntBASIC12.8□□□□□ -0.36
CD74P04233 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CD74P04233 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CD74P04233 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CD74P04233 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CD74P04233 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CD74P04233 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CD74P04233 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CD74P04233 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CD74P04233 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CD74P04233 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CD74P04233 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CD74P04233 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CD74P04233 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC12.8□□□□□ -0.36
CD74P04233 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CD74P04233 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CD74P04233 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CD74P04233 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CD74P04233 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CD74P04233 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
CD74P04233 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12.79□□□□□ -0.36
CD74P04233 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CD74P04233 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CD74P04233 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CD74P04233 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CD74P04233 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CD74P04233 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.79□□□□□ -0.36
CD74P04233 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC12.79□□□□□ -0.36
CD74P04233 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
CD74P04233 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC12.79□□□□□ -0.36
CD74P04233 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC12.79□□□□□ -0.36
CD74P04233 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CD74P04233 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CD74P04233 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CD74P04233 TPM4P1-201ENST00000436100 807 ntBASIC12.79□□□□□ -0.36
CD74P04233 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC12.79□□□□□ -0.36
CD74P04233 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CD74P04233 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC12.79□□□□□ -0.36
CD74P04233 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC12.79□□□□□ -0.36
CD74P04233 RNA5SP419-201ENST00000515908 135 ntBASIC12.79□□□□□ -0.36
CD74P04233 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC12.79□□□□□ -0.36
CD74P04233 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC12.79□□□□□ -0.36
CD74P04233 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC12.79□□□□□ -0.36
CD74P04233 SAMD11P1-201ENST00000571429 661 ntBASIC12.79□□□□□ -0.36
CD74P04233 AL121894.2-201ENST00000602977 491 ntBASIC12.79□□□□□ -0.36
CD74P04233 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
CD74P04233 AL513190.1-201ENST00000621254 727 ntBASIC12.79□□□□□ -0.36
CD74P04233 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC12.79□□□□□ -0.36
CD74P04233 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CD74P04233 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC12.79□□□□□ -0.36
CD74P04233 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CD74P04233 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CD74P04233 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CD74P04233 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CD74P04233 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC12.79□□□□□ -0.36
CD74P04233 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CD74P04233 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
CD74P04233 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC12.79□□□□□ -0.36
CD74P04233 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CD74P04233 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CD74P04233 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CD74P04233 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
CD74P04233 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.79□□□□□ -0.36
CD74P04233 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CD74P04233 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC12.78□□□□□ -0.36
CD74P04233 AC020910.6-201ENST00000623084 1459 ntBASIC12.78□□□□□ -0.36
CD74P04233 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD74P04233 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.78□□□□□ -0.36
CD74P04233 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CD74P04233 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD74P04233 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CD74P04233 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD74P04233 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC12.78□□□□□ -0.36
CD74P04233 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD74P04233 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms