Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRBV12-3P01733 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC11.76□□□□□ -0.53
TRBV12-3P01733 GAPDHP21-201ENST00000450301 1010 ntBASIC11.76□□□□□ -0.53
TRBV12-3P01733 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
TRBV12-3P01733 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
TRBV12-3P01733 AC022137.2-201ENST00000503482 481 ntBASIC11.76□□□□□ -0.53
TRBV12-3P01733 AC106760.1-201ENST00000508690 800 ntBASIC11.76□□□□□ -0.53
TRBV12-3P01733 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
TRBV12-3P01733 FUZ-207ENST00000526575 482 ntTSL 4 BASIC11.76□□□□□ -0.53
TRBV12-3P01733 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
TRBV12-3P01733 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC11.76□□□□□ -0.53
TRBV12-3P01733 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC11.76□□□□□ -0.53
TRBV12-3P01733 PTP4A1P2-201ENST00000546033 454 ntBASIC11.76□□□□□ -0.53
TRBV12-3P01733 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC11.76□□□□□ -0.53
TRBV12-3P01733 RPL28-207ENST00000558815 616 ntTSL 2 BASIC11.76□□□□□ -0.53
TRBV12-3P01733 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC11.76□□□□□ -0.53
TRBV12-3P01733 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC11.76□□□□□ -0.53
TRBV12-3P01733 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
TRBV12-3P01733 PRSS30P-206ENST00000641773 873 ntBASIC11.76□□□□□ -0.53
TRBV12-3P01733 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRBV12-3P01733 KRT8P35-201ENST00000483942 1338 ntBASIC11.76□□□□□ -0.53
TRBV12-3P01733 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC11.76□□□□□ -0.53
TRBV12-3P01733 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRBV12-3P01733 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC11.76□□□□□ -0.53
TRBV12-3P01733 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC11.76□□□□□ -0.53
TRBV12-3P01733 PCDHA3-202ENST00000532566 4594 ntBASIC11.76□□□□□ -0.53
TRBV12-3P01733 LILRP1-201ENST00000444199 1370 ntBASIC11.76□□□□□ -0.53
TRBV12-3P01733 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRBV12-3P01733 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
TRBV12-3P01733 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC11.76□□□□□ -0.53
TRBV12-3P01733 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRBV12-3P01733 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRBV12-3P01733 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC11.75□□□□□ -0.53
TRBV12-3P01733 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TRBV12-3P01733 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
TRBV12-3P01733 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TRBV12-3P01733 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC11.75□□□□□ -0.53
TRBV12-3P01733 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
TRBV12-3P01733 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRBV12-3P01733 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC11.75□□□□□ -0.53
TRBV12-3P01733 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRBV12-3P01733 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRBV12-3P01733 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRBV12-3P01733 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TRBV12-3P01733 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRBV12-3P01733 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRBV12-3P01733 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
TRBV12-3P01733 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRBV12-3P01733 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC11.75□□□□□ -0.53
TRBV12-3P01733 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
TRBV12-3P01733 AL645937.2-201ENST00000396808 931 ntBASIC11.75□□□□□ -0.53
TRBV12-3P01733 BAATP1-201ENST00000412284 1225 ntBASIC11.75□□□□□ -0.53
TRBV12-3P01733 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC11.75□□□□□ -0.53
TRBV12-3P01733 NUS1P3-201ENST00000423502 862 ntBASIC11.75□□□□□ -0.53
TRBV12-3P01733 AC012441.1-201ENST00000446669 685 ntBASIC11.75□□□□□ -0.53
TRBV12-3P01733 BCRP2-202ENST00000447763 634 ntBASIC11.75□□□□□ -0.53
TRBV12-3P01733 USP32P1-208ENST00000506594 1164 ntBASIC11.75□□□□□ -0.53
TRBV12-3P01733 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC11.75□□□□□ -0.53
TRBV12-3P01733 BCRP6-201ENST00000510112 632 ntBASIC11.75□□□□□ -0.53
TRBV12-3P01733 BCRP7-201ENST00000511549 544 ntBASIC11.75□□□□□ -0.53
TRBV12-3P01733 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC11.75□□□□□ -0.53
TRBV12-3P01733 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC11.75□□□□□ -0.53
TRBV12-3P01733 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC11.75□□□□□ -0.53
TRBV12-3P01733 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TRBV12-3P01733 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC11.75□□□□□ -0.53
TRBV12-3P01733 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC11.75□□□□□ -0.53
TRBV12-3P01733 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
TRBV12-3P01733 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC11.75□□□□□ -0.53
TRBV12-3P01733 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TRBV12-3P01733 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
TRBV12-3P01733 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRBV12-3P01733 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRBV12-3P01733 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC11.75□□□□□ -0.53
TRBV12-3P01733 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC11.75□□□□□ -0.53
TRBV12-3P01733 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRBV12-3P01733 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRBV12-3P01733 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC11.75□□□□□ -0.53
TRBV12-3P01733 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
TRBV12-3P01733 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC11.75□□□□□ -0.53
TRBV12-3P01733 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC11.75□□□□□ -0.53
TRBV12-3P01733 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRBV12-3P01733 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRBV12-3P01733 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRBV12-3P01733 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRBV12-3P01733 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRBV12-3P01733 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRBV12-3P01733 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC11.75□□□□□ -0.53
TRBV12-3P01733 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRBV12-3P01733 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRBV12-3P01733 KRT8P14-201ENST00000414254 1442 ntBASIC11.75□□□□□ -0.53
TRBV12-3P01733 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC11.75□□□□□ -0.53
TRBV12-3P01733 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TRBV12-3P01733 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRBV12-3P01733 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC11.75□□□□□ -0.53
TRBV12-3P01733 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
TRBV12-3P01733 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC11.75□□□□□ -0.53
TRBV12-3P01733 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRBV12-3P01733 LRRC59-203ENST00000576448 1531 ntBASIC11.75□□□□□ -0.53
TRBV12-3P01733 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TRBV12-3P01733 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC11.75□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms